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. 2016 Feb 10;6:20837. doi: 10.1038/srep20837

Table 2. Biological validation of RNA-Seq results.

  Gene qPCR (2−ddCt)
P-value Validated?
non-manipulated sham-manipulated albumen-deprived
C≠A; S≠A SPAG4like 1.00 ± 0.27 0.56 ± 0.23 0.75 ± 0.17 NS No
S≠A TNFSF10 1.00 ± 0.13b 0.69 ± 0.09b 1.40 ± 0.07a 0.0006 Yes
  LAPTM4B 1.00 ± 0.16ab 1.96 ± 0.62b 0.50 ± 0.09a 0.0520 Yes
  TMEM86A 1.00 ± 0.07ab 0.93 ± 0.15b 1.42 ± 0.16a 0.0489 Yes
  CKS1B 1.00 ± 0.12ab 1.74 ± 0.39a 0.96 ± 0.08b 0.0777 Yes
  NXPH2 1.00 ± 0.08a 0.45 ± 0.07b 1.06 ± 0.20a 0.0091 Yes
  LRRC3C 1.00 ± 0.14ab 1.68 ± 0.45a 0.70 ± 0.10b 0.0776 Yes
  BMF 1.00 ± 0.10ab 0.74 ± 0.08b 1.32 ± 0.12a 0.0048 Yes
  SEMA6D 1.00 ± 0.17ab 1.70 ± 0.50a 0.63 ± 0.08b 0.0916 No
  H2B-I 1.00 ± 0.16ab 2.12 ± 0.68a 0.67 ± 0.08b 0.0681 No
  GLUL 1.00 ± 0.14 1.20 ± 0.23 1.13 ± 0.12 NS No
  HERPUD1 1.00 ± 0.10 1.38 ± 0.36 1.17 ± 0.29 NS No
  SLC6A6 1.00 ± 0.11 1.18 ± 0.21 1.03 ± 0.06 NS No
  LECT2 1.00 ± 0.29 1.33 ± 0.33 0.65 ± 0.16 NS No
  GJA1 1.00 ± 0.11 0.94 ± 0.11 0.97 ± 0.12 NS No

Gene expression of selected DE genes (P < 0.001 and log2-fold change >1) were measured in 8 samples per treatment via qPCR. a,btreatment means with different superscript are significantly different (P < 0.1).