Table 1.
Differentially expressed proteins.
| 2x | n SPOT | p-value | Protein description | Gene symbol | Swiss prot |
|---|---|---|---|---|---|
| METABOLIC PATHWAYS | |||||
| −2.76 | 1545 | 0.0018 | Transketolase 2 | tktB | P33570 |
| −1.82 | 1530 | 0.0049 | Fumarate reductase flavoprotein subunit | frdA | P00363 |
| −1.73 | 2441 | 0.0042 | Bifunctional protein GlmU | glmU | P0ACC7 |
| −1.67 | 3025 | 0.0023 | Dihydroorotase | pyrC | P05020 |
| −1.62 | 3317 | 0.0068 | Cytidine deaminase | cdd | P0ABF6 |
| −1.62 | 2006 | 0.0032 | Fumarate hydratase class I, anaerobic | fumB | P14407 |
| −1.56 | 2314 | 0.0039 | aspartate ammonia-lyase | aspA | P0AC38 |
| −1.53 | 3125 | 0.0028 | PTS system mannose-specific EIIAB component | manX | P69797 |
| −1.53 | 2041 | 0.0014 | Bifunctional purine biosynthesis protein PurH | purH | P15639 |
| −1.53 | 3125 | 0.0028 | L-threonine dehydratase catabolic TdcB | tdcB | P0AGF6 |
| −1.51 | 2562 | 0.0061 | Thymidine phosphorylase | deoA | P07650 |
| −1.39 | 3005 | 0.0041 | Aspartate–ammonia ligase | asnA | P00963 |
| −1.30 | 1408 | 0.0029 | Catalase-peroxidase | katG | P13029 |
| −1.30 | 2055 | 0.0057 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | ubiD | P0AAB4 |
| −1.30 | 2055 | 0.0057 | Malate synthase A | aceB | P08997 |
| −1.26 | 3070 | 0.0094 | UDP-glucose 4-epimerase | galE | P09147 |
| −1.25 | 2348 | 0.00189 | Glycerol kinase | glpK | P0A6F3 |
| −1.21 | 2467 | 0.0089 | Bifunctional protein FolC | folC | P08192 |
| −1.15 | 3787 | 0.0027 | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | gpmA | P62707 |
| +1.09 | 2400 | 0.0063 | Glutamate decarboxylase beta | gadB | P69910 |
| +1.09 | 2400 | 0.0063 | Bifunctional protein HldE | hldE | P76658 |
| −1.52 | 2050 | 0.00081 | Phosphoenolpyruvate carboxykinase | pck | P22259 |
| −1.40 | 1870 | 0.0015 | Trehalose-6-phosphate hydrolase | treC | P28904 |
| −1.79 | 3026 | 0.0012 | Galactitol−1-phosphate dehydrogenase | gatD | P0A9S4 |
| −1.65 | 2131 | 0.0032 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | gpml | P37689 |
| −1.30 | 2055 | 0.0057 | Phosphoenolpyruvate carboxykinase [ATP] | pckA | P22259 |
| +1.37 | 2105 | 0.0091 | 6-phospho-beta-glucosidase A | bglA | P24240 |
| GLYCOLYSIS/GLUCONEOGENESIS | |||||
| −1.65 | 2131 | 0.0032 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | gpml | P37689 |
| −1.52 | 2050 | 0.00081 | Phosphoenolpyruvate carboxykinase | pck | P22259 |
| −1.51 | 2562 | 0.0061 | 6-phosphogluconate dehydrogenase | gnd | P00350 |
| −1.48 | 3030 | 0.0068 | Aldehyde reductase, NADPH-dependent | yqhD | Q46856 |
| −1.41 | 3078 | 0.0024 | Glyceraldehyde-3-phosphate dehydrogenase A | gapA | P0A9B2 |
| −1.30 | 1408 | 0.0029 | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | aceF | P06959 |
| −1.21 | 2467 | 0.0089 | D-tagatose−1,6-bisphosphate aldolase subunit GatZ | gatZ | P0C8J8 |
| −1.20 | 3721 | 0.0024 | Deoxyribose-phosphate aldolase | deoC | P0A6L0 |
| −1.15 | 3787 | 0.0027 | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | gpmA | P62707 |
| −1.12 | 2062 | 0.0069 | Pyruvate kinase I | pykF | P0AD61 |
| +1.24 | 2169 | 0.0053 | Phosphoglucomutase | pgm | P36938 |
| AMINOACYL-tRNA BIOSYNTHESIS | |||||
| −1.69 | 3047 | 0.0044 | Phenylalanine tRNA synthetase, alpha subunit | pheS | P08312 |
| −1.27 | 1307 | 0.0004 | Threonine–tRNA ligase | thrS | P0A8M3 |
| −1.19 | 3031 | 0.0071 | tRNA-dihydrouridine synthase A | dusA | P32695 |
| −1.17 | 2425 | 0.005 | Histidine–tRNA ligase | hisS | P60906 |
| +1.20 | 1571 | 0.0017 | Methionine–tRNA ligase | metG | P00959 |
| MICROBIAL METABOLISM IN DIVERSE ENVIRONMENTS | |||||
| −2.76 | 1545 | 0.0018 | Transketolase 2 | tktB | P33570 |
| −1.85 | 761 | 0.0062 | Formate dehydrogenase, nitrate-inducible, major subunit | fdnG | P24183 |
| −1.56 | 2314 | 0.0039 | Aldehyde dehydrogenase A, NAD-linked | aldA | P25553 |
| BIOSYNTHESIS OF SECONDARY METABOLITES | |||||
| −5.78 | 3272 | 0.00024 | N-acetylneuraminate lyase | nanA | P0A6L4 |
| −1.68 | 3674 | 0.000046 | Glucosamine-6-phosphate deaminase | nagB | P0A760 |
| −1.72 | 2441 | 0.0042 | Tryptophanase | tnaA | P0A853 |
| −1.30 | 1408 | 0.0029 | Polyribonucleotide nucleotidyltransferase | pnp | P05055 |
| +1.09 | 2400 | 0.0063 | Glutamate decarboxylase beta | gadB | P69910 |
| GLYCEROPHOSPHOLIPID METABOLISM | |||||
| −1.65 | 2131 | 0.0032 | Aerobic glycerol-3-phosphate dehydrogenase | glpD | P13035 |
| −1.49 | 1963 | 0.0055 | Anaerobic glycerol-3-phosphate dehydrogenase subunit A | glpA | P0A9C0 |
| TRANSPORTERS | |||||
| −1.67 | 3025 | 0.0023 | Oligopeptide transport ATP-binding protein OppD | oppD | P76027 |
| −1.12 | 2062 | 0.0069 | Ribose import ATP-binding protein RbsA | rbsA | P04983 |
| +1.37 | 2105 | 0.0091 | Potassium transporter peripheral membrane protein | trkA | P0AGI8 |
| BACTERIAL CHEMOTAXIS AND MOTILITY? | |||||
| −1.32 | 3008 | 0.0066 | Flagellar motor switch protein FliM | fliM | P06974 |
| OTHER | |||||
| −1.62 | 3317 | 0.0068 | Probable deferrochelatase/peroxidase YfeX | yfeX | P76536 |
| −1.53 | 2041 | 0.0014 | Ribonuclease G | rng | P0A9J0 |
| −1.53 | 2041 | 0.0014 | Transcriptional regulatory protein TyrR | tyrR | P07604 |
| −1.38 | 3005 | 0.0041 | Uncharacterized oxidoreductase YdgJ | ydgJ | P77376 |
| −1.32 | 3008 | 0.0066 | Aminomethyltransferase | gcvT | P27248 |
| −1.32 | 3206 | 0.0033 | Probable acrylyl-CoA reductase AcuI | acuI | P26646 |
| −1.30 | 2055 | 0.0057 | Uncharacterized sulfatase YdeN | ydeN | P77318 |
| −1.26 | 3073 | 0.0072 | HTH-type transcriptional regulator CysB | cysB | P0A9F3 |
| −1.26 | 979 | 0.0049 | Elongation factor G | fusA | P0A6M8 |
| −1.26 | 979 | 0.0049 | Chaperone protein ClpB | clpB | P63284 |
| +1.51 | 2148 | 0.0031 | Alkyl hydroperoxide reductase | ahpF | Q8XBT4 |
| +1.45 | 2163 | 0.0077 | Alkyl hydroperoxide reductase subunit F | ahpF | P35340 |
| +1.11 | 1166 | 0.0056 | Outer membrane protein assembly factor BamA | bamA | P0A940 |