Table 2.

Total number of sequencing reads mapped to genome in TAIR 10.0

	T0		T1		T8
Map to genome	Reads number	Percentage	Reads number	Percentage	Reads number	Percentage
Total Reads	65856848	100.00 %	68717410	100.00 %	66618050	100.00 %
Total Base Pairs	5927116320	100.00 %	6184566900	100.00 %	5995624500	100.00 %
Total Mapped Reads	56308614	85.50 %	59953853	87.25 %	58351588	87.59 %
Perfect match	43870842	66.62 %	47185072	68.67 %	46153587	69.28 %
<= 5 bp mismatch	12437772	18.89 %	12768781	18.58 %	12198001	18.31 %
Unique match	53873689	81.80 %	57434680	83.58 %	55751167	83.69 %
Multi-position match	2434925	3.70 %	2519173	3.67 %	2600421	3.90 %
Total Unmapped Reads	9548234	14.50 %	8763557	12.75 %	8266462	12.41 %