KISSPLICE |
One or more RNA-seq read set(s) |
SNPs, small indels, alternative splicing events |
DISCOSNP |
One or more raw genomic read set(s) |
SNP sequences with their coverages |
TAKEABREAK |
One or more raw genomic read set(s) |
Inversion breakpoints |
MAPSEMBLER2 |
Pieces of known sequences, and associated raw read sets |
Validation and visualization of genome structure near a locus of interest |
COMMET |
Several raw metagenomic complex read sets |
Global comparison of input sets at the read level |
LORDEC |
Illumina and PacBio read sets |
Corrected PacBio read set |