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. 2016 Feb;111(2):141–143. doi: 10.1590/0074-02760150416

TABLE. Variable sites identified by next-generation sequencing and analysis of variants.

Sitea QVb Covc Majd Vare Freq (%) pf SB (50%) Type Posg aah
1887 31 295 C T 18.3 1.9 x 10-108 0.34 NS t at His593Tyr
2632 30 456 A G 19.3 2.6 x 10-140 0.54 NS c g a Gln844Arg

a : according to the GenBank RefSeq NC_002640.1;b : quality value (QV) score for base call;c : sequencing coverage (Cov) at position;d : nucleotide found in the majority (Maj) sequence;e : nucleotide found in the variant (Var) sequence;f : variant p-value; g : position at the codon (bold); h : position according to the GenBank RefSeq NP_073286.1; aa; amino acid; Freq: frequency; NS: nonsynonymous; SB: strand-bias.