Table 1. DE genes in Alx1 over-expressed embryos.
| Rank | Trinity Gene ID | mean Normalized count (± S.D.) | FDR | best hit SPU or Genbank ID | common name of the best hit gene | blastx evalue | Annotation | |
|---|---|---|---|---|---|---|---|---|
| Alx1 OE | EGFP OE | |||||||
| 1 | comp134774_c0 | 497.88 (± 84.85) | 52.93 (± 6.09) | 0 | SPU_017963 | Sp-Tnr | 0 | Apfic |
| 2 | comp144351_c0 | 566.44 (± 331.31) | 52.89 (± 7.25) | 2.7E-25 | SPU_004136 | Sp-P19 | 3.0E-17 | App19 |
| 3 | comp142398_c0 | 278.73 (± 170.25) | 23.36 (± 4.17) | 1.6E-21 | XP_005090524 | uncharactarized protein | 2.00E-13 | Ap142398 |
| 4 | comp135208_c0 | 48.45 (± 26.04) | 0.66 (± 0.6) | 5.2E-18 | SPU_019268 | Sp-Shox | 2.0E-34 | Apshox |
| 5 | comp136962_c0 | 119.84 (± 28.95) | 23.42 (± 11.24) | 4.7E-14 | - | - | - | (unknown1) |
| 6 | comp140359_c0 | 7493.33 (± 602.34) | 3096.43 (± 652.69) | 9.8E-12 | XP_00338253 | coactsin-like | 4.00E-43 | ApcactL |
| 7 | comp136548_c2 | 65.7 (± 13.76) | 13.95 (± 4.97) | 7.8E-11 | SPU_019450 | Sp-Itih_2 | 0 | Apitih1 |
| 8 | comp136548_c1 | 69.85 (± 20.77) | 14.23 (± 4.49) | 9.6E-11 | SPU_027343 | Sp-Itih_6 | 2.0E-39 | Apitih2 |
| 9 | comp140934_c0 | 68.87 (± 52.87) | 5.73 (± 0.73) | 7.1E-10 | SPU_015404 | Sp-LamG/Egff3 | 0 | Aplamg1 |
| 10 | comp142546_c0 | 817.07 (± 193) | 181.64 (± 115.8) | 7.3E-10 | XP_001636622 | predicted protein | 0 | Apmdh |
| 11 | comp136548_c0 | 53.25 (± 7.87) | 12.44 (± 4.35) | 1.4E-08 | SPU_027343 | Sp-Itih_6 | 0 | Apitih3 |
| 12 | comp136524_c0 | 200.43 (± 54.96) | 71.4 (± 17.46) | 1.4E-07 | SPU_021744 | Sp-Vwd/Fa58c | 1.0E-19 | Apvwd |
| 13 | comp132292_c0 | 26.73 (± 18.43) | 1.95 (± 1.73) | 2.2E-07 | - | - | - | (unknown2) |
| 14 | comp151049_c0 | 73.86 (± 27.57) | 201.82 (± 22.57) | 2.2E-07 | SPU_006392 | Sp-Rab33 | 0 | Aprab33 |
| 15 | comp125517_c0 | 21.08 (± 13.65) | 2.14 (± 1.19) | 4.5E-05 | SPU_018408 | Sp-P16 | 6.00E-11 | App16 |
| 16 | comp141693_c0 | 428.81 (± 44.26) | 232.06 (± 36.71) | 5.8E-04 | - | - | - | (unknown3) |