Table 2.
Per-individual whole exome SNV load in the 1000 Genomes Project Phase 1 data.
SYNONYMOUS | NON-SYNONYMOUS | |||||||
---|---|---|---|---|---|---|---|---|
DAF <0.5% | DAF 0.5–5% | DAF >5% | Total | DAF <0.5% | DAF 0.5–5% | DAF >5% | Total | |
AVERAGE | 295 | 1,014 | 12,892 | 14,201 | 434 | 1,055 | 10,816 | 12,305 |
YRI | 547 | 2,468 | 12,190 | 15,205 | 691 | 2,377 | 10,056 | 13,130 |
CEU | 175 | 593 | 13,237 | 14,006 | 298 | 709 | 11,173 | 12,180 |
CHB | 218 | 497 | 13,077 | 13,792 | 355 | 563 | 11,026 | 11,944 |
JPT | 240 | 500 | 13,067 | 13,807 | 387 | 571 | 11,012 | 11,970 |
The number of synonymous and non-synonymous SNVs are categorized into three ranges of derived allele frequency (DAF; defined as the allele alternative to the ancestral allele). DAF<0.5% are considered ‘rare’. Ancestry legend, YRI: Yoruba in Ibadan, Nigeria; CEU: Utah Residents (CEPH) with Northwestern European ancestry; CHB: Han Chinese in Beijing; JPT: Japanese in Tokyo, Japan.