TABLE 6.

RNA-binding proteins having motifs enriched in SNF1-dependent mRNAs over their occurrence in the yeast genome

RBPa	Location	P valueb	No. of transcripts in:
			Snf1-dependent genes		Whole genome
			Matchesc	Totald	Matches	Total
Khd1	5′-UTR	3.96E−02	26	34	3,566	6,550
Nrd1	5′-UTR	3.91E−02	15	34	1,484	6,550
Pab1	5′-UTR	3.63E−02	20	34	2,189	6,550
Nsr1	ORF	4.10E−03	12	34	736	6,550
Vts1	ORF	7.41E−03	33	34	4,927	6,550

^aEach RNA-binding protein is represented by one or more distinct motifs.

^bThe probability that the number of Snf1-dependent genes containing one or more RBP binding sites is not enriched over the whole yeast genome. Values have been corrected for multiple hypothesis testing using the method of Benjamini and Hochberg (94).

^cThe number of genes coding for mRNAs with one or more instances of an RBP motif.

^dThe total number of mRNA sequences searched.