Table 1. Novel miRNAs identified in S. japonicum.
Name | Sequences | Reads* | Hairpin locus |
---|---|---|---|
sja-let-7b | AGAGGUAGUGAUUCAUAUGACU | 655,165 | SJC_S000353: 80195–80367 |
sja-let-7s | GAGGUAGUUAGAUGUACGACU | 111,993 | SJC_S000383:436660–436832 |
sja-miR-750 | CCAGAUCUGUCGCUUCCAACU | 281,357 | SJC_S000460:180604–180776 |
sja-miR-1175# | UGAGAUUCAAUUACUUCAACUG | 20,657 | SJC_S000460:180879–181001 |
sja-miR-1989 | UCAGCUGUGUUCAUGUCUUCGA | 2,812 | SJC_S000128:160744–160623 |
sja-miR-new1# | GAGAGAGCACUUUUAUGACGGA | 1,192 | SJC_S004484:20079–20188 |
sja-miR-new2 | AGCUAAAUAGGUUAGUUUGACUGUC | 15,436 | SJC_S016196:787–876 |
sja-lin-4# | UCCCUGAGACCUUAGAGUUGU | 23,558 | N/A |
sja-miR-1b# | UGGAAUGUUGUGAAGUAUGUGC | 1,412,190 | N/A |
sja-mir-277b | AAAAUGCAUCAUCUACCCUAGA | 207,027 | N/A |
* The number is the sum of miRNA reads in all of the 8 libraries.
# indicates that the miRNA has also been identified in S. mansoni.