Table 1.
Type | SNPs | InDels | ||||||
---|---|---|---|---|---|---|---|---|
Non-coding region | Coding region | None | Total | Non-coding region | Coding region | None | Total | |
Anta 82 | 848,752 | 5,231 | 99,327 | 953,310 | 203,207 | 25,458 | 1,390 | 230,055 |
BR 16 | 1,267,827 | 8,302 | 158,063 | 1,434,192 | 300,160 | 38,513 | 2,088 | 340,761 |
BRS 232 | 1,166,390 | 7,772 | 148,274 | 1,322,436 | 275,225 | 35,666 | 1,779 | 312,670 |
BRS 284 | 778,152 | 6,204 | 100,434 | 884,790 | 196,677 | 25,615 | 1,584 | 223,876 |
BRS 360 RR | 1,078,635 | 7,169 | 128,689 | 1,214,493 | 252,198 | 32,059 | 1,731 | 285,988 |
BRS 361 | 1,017,791 | 5,595 | 115,310 | 1,138,696 | 222,364 | 27,243 | 1,354 | 250,961 |
BRS Sambaiba | 1,318,067 | 8,113 | 162,389 | 1,488,569 | 311,172 | 39,236 | 1,909 | 352,317 |
BRS Valiosa RR | 1,321,233 | 7,824 | 158,653 | 1,487,710 | 296,309 | 38,087 | 1,812 | 336,208 |
BRS/GO 8360 | 839,016 | 5,276 | 102,261 | 946,553 | 202,591 | 26,176 | 1,377 | 230,144 |
BRS/GO 8660 | 1,373,660 | 8,511 | 159,418 | 1,541,589 | 299,360 | 37,447 | 1,905 | 338,712 |
BRS/GO Chapadões | 1,296,919 | 7,775 | 152,967 | 1,457,661 | 304,194 | 38,021 | 1,898 | 344,113 |
BRSMG 850G RR | 1,273,571 | 7,868 | 157,019 | 1,438,458 | 301,255 | 38,665 | 1,891 | 341,811 |
BRSMT Pintado | 1,326,229 | 8,574 | 151,052 | 1,485,855 | 299,477 | 36,717 | 2,006 | 338,200 |
BRSMT Uirapuru | 1,376,297 | 8,346 | 162,189 | 1,546,832 | 314,856 | 39,732 | 1,909 | 356,497 |
CD 201 | 1,305,772 | 8,447 | 150,706 | 1,464,925 | 298,825 | 37,151 | 2,023 | 337,999 |
Conquista | 1,338,601 | 7,955 | 159,887 | 1,506,443 | 317,096 | 39,952 | 1,952 | 359,000 |
Doko | 1,414,796 | 9,372 | 165,725 | 1,589,893 | 327,783 | 40,606 | 2,221 | 370,610 |
Embrapa 48 | 1,091,441 | 7,882 | 136,232 | 1,235,555 | 264,083 | 33,767 | 1,807 | 299,657 |
Emgopa 301 | 1,208,853 | 7,825 | 144,216 | 1,360,894 | 281,240 | 35,661 | 1,758 | 318,659 |
FT Abyara | 1,241,667 | 8,250 | 153,768 | 1,403,685 | 291,494 | 37,394 | 1,761 | 330,649 |
FT Cristalina | 1,341,883 | 8,165 | 160,115 | 1,510,163 | 312,875 | 39,400 | 1,922 | 354,197 |
IAC 8 | 1,279,510 | 7,546 | 150,883 | 1,437,939 | 295,688 | 37,126 | 1,791 | 334,605 |
IAS 5 | 1,162,970 | 8,576 | 141,328 | 1,312,874 | 275,267 | 34,213 | 1,974 | 311,454 |
NA 5909 RG | 949,130 | 6,184 | 108,680 | 1,063,994 | 222,730 | 27,813 | 1,398 | 251,941 |
P98Y11 | 1,341,733 | 8,376 | 156,262 | 1,506,371 | 301,238 | 37,248 | 1,942 | 340,428 |
Paraná | 1,168,303 | 8,209 | 139,875 | 1,316,387 | 283,149 | 35,058 | 1,873 | 320,080 |
Santa Rosa | 1,485,334 | 9,409 | 178,350 | 1,673,093 | 340,609 | 42,878 | 2,177 | 385,664 |
VMAX RR | 1,008,968 | 6,154 | 107,398 | 1,122,520 | 231,321 | 27,871 | 1,396 | 260,588 |
Non-coding regions: corresponding to allelic variations up to 5 kb upstream or downstream of genes and intergenic regions modifications; Coding region: corresponding to UTR regions, exons, introns, and splice site modifications; None: no description available for the region