Table 4.
Primer name | Primer sequence (5′–3′) | Amplicon size (bp) | Total number of bands | Number of polymorphic bands | Polymorphism (%) | PIC value |
---|---|---|---|---|---|---|
ISD-1 | GAGAGAGAGAGAGG | 186–1485 | 10 | 8 | 80 | 0.88 |
ISD-3 | GAGAGAGAGAGACC | 128–1626 | 11 | 6 | 55 | 0.89 |
ISD-4 | GTGTGTGTGTGTCC | 79–1133 | 12 | 9 | 75 | 0.91 |
ISD-7 | CTCTCTCTCTCTCTCTAC | 113–879 | 8 | 5 | 63 | 0.79 |
ISD-16 | AGAGAGAGAGAGAGAGC | 378–1890 | 11 | 11 | 100 | 0.9 |
ISD-21 | ACACACACACACACACTG | 66–1232 | 6 | 5 | 83 | 0.81 |
ISD-36 | GATAATACGAGAGAGAGAGAGA | 92–1534 | 9 | 8 | 89 | 0.82 |
ISD-50 | GACGACGACGACG | 843–1052 | 10 | 7 | 70 | 0.89 |
UBC-808 | AGAGAGAGAGAGAGAC | 73–1364 | 10 | 8 | 80 | 0.84 |
UBC-811 | GAGAGAGAGAGAGAGAC | 127–1345 | 13 | 9 | 69 | 0.91 |
UBC-813 | ACACACACACACACACT | 132–1759 | 12 | 8 | 67 | 0.88 |
UBC-814 | CTCTCTCTCTCTCTA | 75–542 | 7 | 3 | 43 | 0.82 |
UBC-815 | CTCTCTCTCTCTCTCTG | 277–1980 | 7 | 7 | 100 | 0.8 |
UBC-816 | CACACACACACACACAT | 106–1796 | 13 | 12 | 92 | 0.89 |
UBC-818 | CACACACACACACACAG | 114–1349 | 12 | 5 | 42 | 0.91 |
UBC-822 | TCTCTCTCTCTCTCTCA | 153–1006 | 10 | 7 | 70 | 0.86 |
UBC-825 | ACACACACACACACACT | 127–609 | 7 | 6 | 86 | 0.83 |
UBC-834 | AGAGAGAGAGAGAGAGAT | 97–1433 | 12 | 6 | 50 | 0.91 |
UBC-858 | TGTGTGTGTGTGTGTGRT | 108–1831 | 14 | 13 | 93 | 0.9 |
UBC-888 | BDBCACACACACACACA | 128–694 | 7 | 6 | 86 | 0.85 |
UBC-890 | VHVGTGTGTGTGTGTGT | 188–1433 | 7 | 7 | 100 | 0.79 |
Total | 208 | 156 | – | – | ||
Average | 9.9 | 7.42 | 75.77 | 0.86 |