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. 2016 Feb 1;26(1):29–43. doi: 10.1089/nat.2015.0566

Table 1.

Natural RNAs That Regulate Transcription Factors

RNA TF target Regulation
5S RNA TFIIIA Its own transcription
6S RNA σ70-RNAp Wide-range regulation of transcription of several genes
3′ UTR of cad Bicoid Expression of caudal
TSU STAT1 Reduces nuclear translocation and suppression of MHC genes
NRSE-RNA NRSF/REST Inhibits REST from binding to dsDNA and acting as a repressor
HSR1 HSF1 Stimulates heat shock response by stabilizing HSF1
HDV RNAP II Regulates its own transcription
7SK HMGA1 Inhibits HMGA1 binding to dsDNA
ncRNA anti-p53 p53 Fine tunes p53 response
Gas5 GR Reduces GR response
SRA SRA Activates SRA response by acting as a scaffold

Gas5, growth arrest-specific 5; GR, glucocorticoid receptor; HDV, hepatitis delta virus; HMGA1, high mobility group protein A1; HSF1, heat shock transcription factor 1; HSR1, heat shock RNA-1; MHC, major histocompatibility complex; NRSE, neuron restrictive silencer element; NRSF, neuron-restrictive silencer factor; REST, RE1-silencing transcription factor; RNAP II, RNA polymerase II; SRA, steroid receptor RNA activator; STAT1, signal transducers and activators of transcription; TF, transcription factor; TSU, trophoblast STAT utron; UTR, untranslated region.