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. 2016 Jan 5;67(4):1109–1121. doi: 10.1093/jxb/erv552

Table 1.

DNA methylation status in barley leaves and roots under specific water conditions

MSAP band type a Leaves Roots
Control Water deficit stress Rewatering Control Water deficit stress Rewatering
I 180 194 202 162 152 181
II 156 131 152 96 87 79
III 303 273 286 288 298 278
IV 8 49 7 7 16 15
Total analysed bands 647 647 647 553 553 553
Total methylated bandsb 467 453 445 391 401 372
Fully methylated bandsc 311 322 293 295 314 293
MSAP (%)d 72.1 70.0 68.8 70.7 72.5 67.3
Hemi-methylated ratio (%)e 24.1 20.3 23.5 17.4 15.7 14.3
Fully methylated ratio (%)f 48.1 49.8 45.3 53.4 56.8 53.0

a Type I is the presence of bands in both EcoRI/HpaII and EcoRI/MspI digests and indicates the absence of methylation; type II are bands generated in EcoRI/HpaII digests but not in EcoRI/MspI digests; type III bands appear in EcoRI/MspI digests but not in EcoRI/HpaII digests; and type IV represents the absence of band in both enzyme combinations

b Total methylated bands are II+III+IV bands.

c Fully methylated are III+IV bands.

d MSAP is a percentage ratio of total methylated bands (II+III+IV) to total amplified bands.

e Hemi-methylated ratio is a percentage ratio of total hemi-methylated bands (II) to total amplified bands.

f Fully methylated ratio is a percentage ratio of fully methylated bands (III+IV) to total amplified bands.