Table 2.
ST | MLST allelic profile* | spa types | spa repeat succession | spa CC |
---|---|---|---|---|
ST30 (18) | 2-2-2-2-6-3-2 | t018 (2) | -24-24 | CC021/012 |
t093 (1) | 12 | |||
t012 (7) | 24 | |||
t021 (6) | ||||
t1382 (1) | 01 | |||
t11956 (1) | 23 | |||
ST243 (1) | -5- | t021 (1) | 15-12-----16-02-16-02-25-17-24-------- | |
ST2960a (1) | -268- | t021 (1) | 15-12-----16-02-16-02-25-17-24-------- | |
ST2954a (2) | -330 | t298 (2) | 15-12-----16-02-------------17-24-------- | |
ST34 (5) | 8- | t166 (2) | CC166 | |
t369 (1) | ||||
t4437 (1) | ||||
t13129b (1) | 51 | Singleton |
MLST allelic profile (arc-aroe-glpf-gmk-pta-tpi-yiql); numbers between brackets represent the number of strains;
newly described ST;
newly described spa type; MLST alleles shared with the probable founder of MLST CC30, ST30, are colored in sky blue; the spa sequence repetitions shared with the probable founder of spa CC021/012, t021, appear in blue; the spa sequence repetitions shared with the probable founder of spa CC166, t166, are in red; the spa sequence repetitions of the new spa type t13129 shared with the probable founder of spa CC166 are in green. repeat 23 differs in one base from repeat 16; repeat 01 differs in three bases from repeat 15; repeat 51 differs in three bases from repeat 44.