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. 2016 Feb 16;6:8. doi: 10.3389/fcimb.2016.00008

Table 2.

Description of all the STs found in the present study.

ST MLST allelic profile* spa types spa repeat succession spa CC
ST30 (18) 2-2-2-2-6-3-2 t018 (2) 15-12-----16-02-16-02-25-17-24-24-24 CC021/012
t093 (1) 15-12-12-16-02-16-02-25-17-24-24----
t012 (7) 15-12-----16-02-16-02-25-17-24-24----
t021 (6) 15-12-----16-02-16-02-25-17-24--------
t1382 (1) 01-12-----16-02-16-02-25-----24--------
t11956 (1) 15-12-----23-----16-02-25-17-24--------
ST243 (1) 2-2-5-2-6-3-2 t021 (1) 15-12-----16-02-16-02-25-17-24--------
ST2960a (1) 2-2-2-2-6-268-2 t021 (1) 15-12-----16-02-16-02-25-17-24--------
ST2954a (2) 2-2-2-2-6-3-330 t298 (2) 15-12-----16-02-------------17-24--------
ST34 (5) 8-2-2-2-6-3-2 t166 (2) 04-44-33-31-12-16-34-16-12-25-22-34 CC166
t369 (1) 04-44-----31-12-16-34-16-12-25-22-34
t4437 (1) 04-44-33-31-12-16---------12-25-22-34
t13129b (1) 04-51----------------34-16 -12-25-22-34 Singleton
*

MLST allelic profile (arc-aroe-glpf-gmk-pta-tpi-yiql); numbers between brackets represent the number of strains;

a

newly described ST;

b

newly described spa type; MLST alleles shared with the probable founder of MLST CC30, ST30, are colored in sky blue; the spa sequence repetitions shared with the probable founder of spa CC021/012, t021, appear in blue; the spa sequence repetitions shared with the probable founder of spa CC166, t166, are in red; the spa sequence repetitions of the new spa type t13129 shared with the probable founder of spa CC166 are in green. repeat 23 differs in one base from repeat 16; repeat 01 differs in three bases from repeat 15; repeat 51 differs in three bases from repeat 44.