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. 2016 Feb 16;6:19868. doi: 10.1038/srep19868

Table 2. Association results for 11 SNPs in FGF2 with BMI, fat mass and WHRadjBMI in the Chinese discovery sample.

No. SNP Physical Position Genic Position A1/A2a MAF BMI
Fat Mass
WHRadjBMI
β eQTLb P eQTLb
β P β P β P
1 rs1449683 123748086 Exon1 T/C 0.165 −0.255 0.061 −0.877 1.11 × 10−4 −3.03 × 10−3 0.261 −0.059 4.86 × 10−3
2 rs308403 123757748 Intron1 C/T 0.320 0.170 0.140 0.251 0.193 1.54 × 10−3 0.501
3 rs308418 123768263 Intron1 A/G 0.157 0.139 0.340 0.124 0.610 5.38 × 10−4 0.852 −0.030 0.288
4 rs167428 123773439 Intron1 C/T 0.120 −0.367 0.019 −0.986 1.67 × 104 −3.10 × 10−3 0.321 −0.059 2.05 × 10−5
5 rs308442 123774913 Intron1 A/T 0.305 −0.202 0.107 −0.724 5.20 × 104 −1.21 × 10−3 0.625 −0.065 1.40 × 10−6
6 rs3789138 123784721 Intron1 G/A 0.500 −0.127 0.212 −0.377 0.027 1.66 × 10−3 0.412 0.070 5.09 × 10−6
7 rs308387 123786832 Intron1 A/G 0. 043 −0.115 0.651 −0.299 0.482 −1.03 × 10−2 0.041
8 rs12506710 123794127 Intron1 C/T 0.445 0.157 0.122 0.419 0.013 −9.34 × 10−5 0.963
9 rs10011927 123798428 Intron2 C/T 0.449 0.155 0.127 0.427 0.011 5.77 × 10−5 0.977
10 rs1048201 123814308 3′UTR T/C 0.447 0.173 0.089 0.450 7.92 × 10−3 −2.06 × 10−4 0.919 0.046 0.010
11 rs1476217 123818511 3′UTR C/A 0.452 0.157 0.135 0.432 0.013 3.44 × 10−4 0.869 −0.016 0.331

Note: MAF, minor allele frequency. β is calculated with respect to the minor allele. Significant P values after multiple testing adjustment (P < 0.0045) are shown in bold.

aA1 represents the minor allele.

bβ eQTL and P eQTL are shown for 210 HapMap unrelated individuals from 4 populations. β eQTL is calculated with respect to the minor allele.