Table 1. List of primers used in this study.
Primer | Sequence | Remark |
---|---|---|
Cloning | ||
codY’ fw | TTTTAAGCTTGAAGAGCAATTGGCAGAAGAA | Hind III |
codY’ rv | TTTTGAATTCGCAATCACAGAAGCAGTCAAT | EcoR I |
‘a’: codYtest1 | CATCAGTCGTATAGGTCAGAT | / |
‘b’: codYtest2 | AATGACGTTTATCCATCCAAC | / |
‘c’: pSET4Stest2 | AATGACGTTTATCCATCCAAC | / |
‘d’: pSET4Stest1 | TCGCTATTACGCCAGCTG | / |
X-f: | TCTCTACACAAAGTGGGCTACC | |
X-r: | GACTGGCTCGCAACCTTCTT | |
Y-f: | CCGATAGAAGAAGCAGCCTCT | |
Y-r: | ACGGCACACTTAAATCCTTTGA | |
CodY Overexpression | ||
his-codY1 fw | TTTTCCATGGGCCATCATCATCATCATCACAGCATGACAACATTATTAGAGAAGACAC | Nco I |
his-codY1 rv | TCTTGGATCCTTAGTAGTCACGTTTCTTAATTTCAT | BamH I |
qRT- PCR | ||
ilvH-F | GAGTGAGGTGCTACATCGACAACAT | SSU05_1887 |
ilvH-R | AACAAATCATCAAACAGCTAAACCG | |
bap2-F | CTTTACGACGACGGCTGGCTTGATT | SSU05_0780 |
bap2-R | GTGATGATATTGTTCAAACCGAGGT | |
glo-F | CCAATCATCGAAACGGAACCAATC | SSU05_0725 |
glo-R | TATGATAGGTCAAGCCAAGCAACTG | |
guaA-F | CCTTTTTCGGCGGTGGACAGGACTA | SSU05_1472 |
guaA-R | TAATATTGACCGAGCAACTGGAAGC | |
acc-F | TGGCTTCAATGGGCACAGTGGT | SSU05_1797 |
acc-R | GTAAAGAGGACGACTGGCAAAC | |
cps2J-F | ACGCAGAGCAAGATGGTAGAATAAAA | SSU05_0573 |
cps2J-R | CAAGTAACCCTCCCGACAAATCACTAT | SSU05_0573 |
16S RNA-F | ATGGACCTGCGTTGTATTAGC | |
16S RNA-R | CATTGCCGAAGATTCCCTAC |
*Underlined regions in the primers represent the cleavage sites for the restriction enzymes mentioned in the remarks column; qRT- PCR, Quantitative Real Time PCR.