Table 3. Peptides cross-linked to Ytm1-CH.
| Proteins IDs | Peptides cross-linked | Total spectra | E-value | error ppm |
|---|---|---|---|---|
| Ytm1(462)-Ytm1(459) | CDPHHHHHHHHHH-GDNIFKNR | 36 | 3.94E-08 | 0.11756 |
| Ytm1(462)-Ytm1(453) | CDPHHHHHHHHHH-IQINKGDNIFK | 15 | 5.10E-09 | −0.41168 |
| Ytm1(462)-Ytm1(408) | CDPHHHHHHHHHH-STSPMYTITR | 29 | 2.22E-11 | −0.23341 |
| Ytm1(462)-Ytm1(74) | CDPHHHHHHHHHH-TSLHDYLTKK | 1 | 4.94E-06 | 0.10250 |
| Ytm1(462)-Ytm1(365) | CDPHHHHHHHHHH-VGASSKVTQQQLIGHK | 4 | 1.57E-09 | 0.46282 |
| Ytm1(462)-Ytm1(437) | CDPHHHHHHHHHH-WAEKVGIISAGQDK | 11 | 1.98E-10 | 0.34134 |
| Ytm1(462)-Nop7(342) | CDPHHHHHHHHHH-NKGDILIQPSK | 3 | 4.10E-07 | −0.54858 |
| Ytm1(462)-Nop7(600) | CDPHHHHHHHHHH-LNKLDSK | 1 | 1.08E-05 | 0.35673 |
| Ytm1(462)-Rpl8(63) | CDPHHHHHHHHHH-KILSIR | 2 | 1.16E-05 | 0.05832 |
Proteins and the positions of the amino acids cross-linked together are shown, as well as the sequences of cross-linked peptides identified by MS with the position of each amino acids cross-linked together. The total number of spectra for each cross-linked peptide pair, E-value and corresponding mass error in ppm are also indicated.