Table 4. Peptides cross-linked to Nop7-CH.
| Proteins IDs | Peptides cross-linked | Total spectra | E-value | error ppm |
|---|---|---|---|---|
| Nop7(607)-Nop7(597) | CDPHHHHHHHHHH-AKLNK | 2 | 1.08E-05 | −1.46492 |
| Nop7(607)-Nop7(600) | CDPHHHHHHHHHH-LNKLDSK | 8 | 8.40E-07 | 0.08830 |
| Nop7(607)-Nop7(571) | CDPHHHHHHHHHH-MKYSNAK | 1 | 1.64E-06 | −0.27318 |
| Nop7(607)-Nop7(593) | CDPHHHHHHHHHH-QIAKQK | 1 | 2.30E-04 | −2.07383 |
| Nop7(607)-Nop7(533) | CDPHHHHHHHHHH-YSETSEADKDVNK | 1 | 4.73E-08 | −0.32862 |
| Nop7(607)-Ytm1(459) | RCDPHHHHHHHHHH-GDNIFKNR | 7 | 5.51E-06 | −0.12427 |
Proteins and positions of cross-linked amino acids are shown, as well as sequences of cross-linked peptides identified by MS with cross-linked amino acids marked in bold. The total number of spectra for each cross-linked peptide pair, E-value and corresponding mass error in ppm are also indicated.