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Prediction of secondary structure of RpoS by SOPMA and GOR IV
| Secondary structure | GOR IV | SOPMA | ||
|---|---|---|---|---|
| Length | Percent | Length | Percent | |
| Alpha helix (Hh) | 169 | 50.60% | 193 | 57.78% |
| 310 helix (Gg) | 0 | 0.00% | 0 | 0.00% |
| Pi helix (Ii) | 0 | 0.00% | 0 | 0.00% |
| Beta bridge (Bb) | 0 | 0.00% | 0 | 0.00% |
| Extended strand (Ee) | 30 | 8.98% | 31 | 9.28% |
| Beta turn (Tt) | 0 | 0.00% | 16 | 4.79% |
| Bend region (Ss) | 0 | 0.00% | 0 | 0.00% |
| Random coil (Cc) | 135 | 40.42% | 94 | 28.14% |
| Ambiguous states | 0 | 0.00% | 0 | 0.00% |
| Other states | 0 | 0.00% | 0 | 0.00% |
| Sequence length | 334 | 334 | ||
