Table 1. Genome properties of the isolate DDT-1.
| Property | Value | Property | Value |
|---|---|---|---|
| Raw reads size (bp) | 1,767,899,136 | sRNA total length (bp) | 1795 |
| Clean reads size (bp) | 1,496,317,952 | ncRNAs | 1 |
| Genome size (bp) | 4,514,569 | LTR number | 27 |
| Fold coverage | 308× | LTR average length (bp) | 79 |
| GC content (%) | 66.92 | LTR total length (bp) | 2140 |
| Contigs (>500 bp) | 97 | LINE number | 7 |
| N50 length (bp) | 80,532 | LINE average length (bp) | 137 |
| N90 length (bp) | 29,764 | LINE total length (bp) | 958 |
| Max length (bp) | 236,154 | SINE number | 14 |
| Min length (bp) | 510 | SINE average length (bp) | 64 |
| Genes | 4,108 | SINE total length (bp) | 892 |
| Protein-coding genes | 4,033 | TRF number | 221 |
| Pseudo genes | 75 | TRF repeat size (bp) | 3–621 |
| Frameshifted genes | 24 | TRF total length (bp) | 13,342 |
| Protein-coding genes assigned to COGs | 2,807 | Minisatellite DNA number | 188 |
| KEGG mapping number | 1,601 | Minisatellite DNA repeat size (bp) | 12–51 |
| Gene average length (bp) | 948 | Minisatellite DNA total length (bp) | 9485 |
| Kmer depth | 29 | Microsatellite DNA number | 10 |
| tRNAs | 67 | Microsatellite DNA repeat size (bp) | 3–6 |
| tRNA average length (bp) | 78 | Microsatellite DNA total length (bp) | 428 |
| tRNA total length (bp) | 5,160 | 5S rRNAs | 3 |
| sRNAs | 14 | 16S rRNAs | 4 |
| sRNA average length (bp) | 128 | 23S rRNAs | 1 |