Fig. 2.—

Overview of the genomic organization of the AgMNPV pangenome. Red arrows represent ORFs previously annotated in the genome of AgMNPV-2D (Oliveira et al. 2006), whereas yellow ones are new ORFs not previously reported for AgMNPV-2D. These ORFs can be coding sequences absent in the isolate 2D; ORFs that were not annotated in that isolate; or ORFs derived from events of gene fusion/fusion. Green and blue rectangles stand for hrs and drs, respectively. Asterisks (*) indicate the genomic position of baculoviral core genes. The small diamonds between ORFs indicate different levels of genome compaction, such as overlaps between coding sequences (green, blue, red) and short intergenic spacers (gray diamonds).