Table 2. Number of overlapping differentially expressed genes between comparisons.

	Individual Comparisons			Overlapping Genes Between Comparisons
Row	Comparison	DE genes	2-Fold Change	U0 to U24	U0 to U48	U0 to U72	U24 to U48	U24 to U72	U48 to U72	G48 to H48	G72 to H72	G48 to G72	H48 to H72	G48 to H72	H48 to G72
1	Uninf 0hr to Uninf 24hr	10245	5846	-	8764	8662	7196	7470	5078	2749	4071	5202	5543	5914	5731
2	Uninf 0hr to Uninf 48hr	11056	6740	4602	-	9957	7907	8137	5589	2980	4364	5714	6117	6471	6289
3	Uninf 0hr to Uninf 72hr	11323	6862	4377	5771	-	7891	8401	5734	2934	4399	5874	6263	6605	6418
4	Uninf 24hr to Uninf 48hr	9431	3284	1801	2482	2407	-	7993	4956	2660	3815	5079	5482	5759	5582
5	Uninf 24hr to Uninf 72hr	10188	4177	2106	2692	3020	2556	-	5445	2663	4051	5616	5885	6100	6146
6	Uninf 48hr to Uninf 72hr	6698	1586	793	1110	1150	916	1181	-	2157	3034	5488	4800	4764	5396
7	GFP 48hr to HBV 48hr	3323	115	60	84	90	71	73	44	-	2064	2205	2341	2580	2534
8	GFP 72hr to HBV 72hr	5070	512	256	333	371	256	325	175	56	-	3065	3320	3732	3460
9	GFP 48hr to GFP 72hr	6973	1814	841	1172	1239	1001	1272	1268	77	215	-	5289	5316	5705
10	HBV 48hr to HBV 72hr	7447	1899	876	1239	1244	1009	1173	1054	54	215	1246	-	6135	5460
11	GFP 48hr to HBV 72hr	7910	2007	947	1262	1305	1007	1184	1006	56	261	1274	1458	-	5152
12	HBV 48hr to GFP 72hr	7713	2132	996	1391	1418	1149	1446	1286	65	242	1493	1393	1143	-

*Number above “-”indicates total DEG in common between indicated comparisons. Number below “-”indicates number of these DEG with at least a 2-fold change.

*Abbreviations: U = Uninfected, G = AdGFP-infected, H = AdGFP-HBV-infected