Table 1. Nucleotide and amino acid sequence similarity (%) between NVAV strain Te34 and other representative rodent-, shrew-, mole- and bat-borne hantaviruses.
| Virus strain | S segment |
M segment |
L segment |
|||
|---|---|---|---|---|---|---|
| 1,284 nt | 428 aa | 3,381 nt | 1,127 aa | 6,471 nt | 2,157 aa | |
| NVAV MSB95703 | 86.4 | 96.5 | 82.4 | 97.7 | 85.7 | 96.4 |
| NVAV 1135 | 99.8 | 99.5 | – | – | 99.9 | 99.8 |
| NVAV 2086 | 97.7 | 99.5 | – | – | 96.3 | 100.0 |
| NVAV 2097 | 99.6 | 100.0 | – | – | 95.9 | 99.1 |
| NVAV YA0077 | 85.0 | 97.7 | – | – | 83.5 | 97.0 |
| NVAV YA0087 | 86.1 | 97.4 | – | – | 85.5 | 97.4 |
| NVAV YA0109 | 86.2 | 97.4 | – | – | 84.4 | 97.4 |
| XSV F42682 | 59.3 | 56.4 | 63.2 | 64.3 | 71.0 | 78.8 |
| LBV BT20 | 57.9 | 58.3 | 63.5 | 58.0 | 68.8 | 68.2 |
| LQUV Ra10 | 54.9 | 54.6 | 44.3 | 44.4 | 67.9 | 71.3 |
| HUPV Pa1 | 61.6 | 57.6 | – | – | 71.7 | 79.8 |
| MOYV KB576 | – | – | – | – | 70.4 | 77.8 |
| MGBV 1209 | – | – | – | – | 68.8 | 68.6 |
| MJNV Cl 05-11 | 50.2 | 44.9 | 41.2 | 41.2 | 65.9 | 63.0 |
| TPMV VRC66412 | 49.2 | 47.0 | 42.5 | 42.0 | 66.2 | 62.6 |
| ULUV FMNH158302 | 62.0 | 48.1 | 55.9 | 40.6 | 64.6 | 61.4 |
| KMJV FMNH174124 | 50.8 | 49.1 | 49.7 | 42.1 | 66.7 | 62.7 |
| ASAV N10 | 50.9 | 48.4 | 54.6 | 45.7 | 66.3 | 62.1 |
| OXBV Ng1453 | 51.5 | 50.0 | 54.4 | 45.8 | 63.9 | 61.3 |
| JMSV MSB144475 | 51.4 | 49.5 | 60.0 | 49.8 | 65.1 | 62.8 |
| SWSV mp70 | 51.6 | 50.7 | 54.6 | 60.2 | 62.8 | 58.7 |
| QHSV YN05-284 | 53.0 | 49.3 | 61.2 | 51.1 | 71.2 | 73.8 |
| KKMV MSB148794 | 58.4 | 48.8 | 57.3 | 45.2 | 64.4 | 62.3 |
| CBNV CBN-3 | 57.2 | 50.2 | 46.8 | 44.3 | 66.5 | 61.9 |
| JJUV 10-11 | 50.9 | 50.7 | 52.4 | 45.0 | 64.6 | 60.1 |
| TGNV Tan826 | 64.0 | 47.6 | – | – | 70.3 | 64.2 |
| AZGV KBM15 | 39.4 | 50.0 | 55.6 | 40.6 | 65.6 | 61.4 |
| BOWV VN1512 | 59.1 | 49.1 | 44.9 | 43.5 | 64.8 | 60.6 |
| RKPV MSB57412 | 57.9 | 52.3 | 54.3 | 48.6 | 65.4 | 60.8 |
| HTNV 76-118 | 50.4 | 51.4 | 52.8 | 45.1 | 65.7 | 61.7 |
| SEOV 80-39 | 57.7 | 49.5 | 42.9 | 45.2 | 65.3 | 61.8 |
| SOOV SOO-1 | 56.6 | 50.9 | 50.6 | 44.9 | 65.2 | 61.9 |
| DOBV Greece | 57.5 | 51.9 | 43.4 | 45.3 | 65.0 | 62.5 |
| ANDV Chile9717869 | 53.4 | 51.4 | 42.9 | 46.1 | 64.8 | 60.7 |
| SNV NMH10 | 51.3 | 51.4 | 43.4 | 46.6 | 65.6 | 61.3 |
| PUUV Sotkamo | 58.6 | 53.3 | 45.6 | 46.2 | 65.3 | 61.1 |
| TULV M5302v | 51.6 | 51.6 | 57.2 | 47.5 | 65.4 | 61.4 |
| PHV PH-1 | 50.1 | 50.0 | 59.1 | 47.1 | 64.1 | 60.9 |
Abbreviations: ANDV, Andes virus; ASAV, Asama virus; AZGV, Azagny virus; BOWV, Bowé virus; CBNV, Cao Bang virus; DOBV, Dobrava virus; HTNV, Hantaan virus; HUPV, Huangpi virus; JMSV, Jemez Spring virus; JJUV, Jeju virus; KKMV, Kenkeme virus; KMJV, Kilimanjaro virus; LBV, Laibin virus; LQUV, Longquan virus; MGBV, Magboi virus; MJNV, Imjin virus; MOYV, Mouyassué virus; NVAV, Nova virus; OXBV, Oxbow virus; PHV, Prospect Hill virus; PUUV, Puumala virus; QHSV, Qian Hu Shan virus; RKPV, Rockport virus; SEOV, Seoul virus; SNV, Sin Nombre virus; SOOV, Soochong virus; SWSV, Seewis virus; TGNV, Tanganya virus; TPMV, Thottapalayam virus; TULV, Tula virus; ULUV, Uluguru virus; XSV, Xuan Son virus. nt, nucleotides; aa, amino acids.– indicates that no sequences are available.