Table 1. Candidate variants selected for genotyping.
SNP | Gene | Site | Description |
---|---|---|---|
rs1127354 | ITPA | Exon | Non-synonymous variants detected by NGS |
rs2280090 | ADAM33 | Exon | |
rs17857295 | MAVS | Exon | |
rs6115814 | ITPA | DHS | Functional variants detected variants by NGS |
rs6116080 | PANK2 | DHS | |
rs6084506 | PANK2 | DHS | |
rs1132922 | MAVS | 3′-UTR | |
rs11087570 | ITPA | Intron | TagSNPs covering ITPA gene |
rs8362 | ITPA | Exon | |
rs6139034 | ITPA | Intron | |
rs13830 | ITPA | 3′-UTR | Additional variant |
Abbreviations: DHS, DNaseI hypersensitivity site; NGS, next-generation sequencing; SNP, single-nucleotide polymorphism; UTR, untranslated region.