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. 2016 Feb 1;113(6):1648–1653. doi: 10.1073/pnas.1520300113

Table S3.

Primers used in this study

Primer na+G5:H94me Sequence (5′–3′)
VPA0009_1F AGGATAAACTCGAGCGGCATTAAGTTTGGGTAGTC
VPA0009_1R AGTTAGGAATTCATGAAATCACTCCGATAATCTTG
VPA0009_2F AGTTAGGAATTCGTAACTTGAAATTGATCAAGTTAAG
VPA0009_2R AGTTAGAGATCTGCGCCTGCAGTTTTCGC
VPA0149_1F GCTTATCGATACCGTCGACCCTCGATGAAAGCGCGCTGCAGTAC
VPA0149_1R CGACTTGAACTGCGATGCCTGGCGCCCACAGATTCTAAATAAC
VPA0149_2F CAGGCATCGCAGTTCAAGTCGCGGGTAACAATGAAGTGAACTCG
VPA0149_2R CACTAGTGACGCGTACTCGAAGAAACGTTCACGGTTACGGC
VPA0710_1F GCTTATCGATACCGTCGACCCTCGACTTCTTCTTCGCTGATCAAAC
VPA0710_1R CGACTTGAACTGCGATGCCTGACTATCTAATTTGTCTACTCCGC
VPA0710_2F CAGGCATCGCAGTTCAAGTCGTGGATTTAAAACAGAGCTCAGG
VPA0710_2R CACTAGTGACGCGTACTCGACACTTGAGGTAATTAAAGCGGC
VPA0736_1F GCTTATCGATACCGTCGACCCTCGAACGAACCCAGGAGAAGGTTG
VPA0736_1R CGACTTGAACTGCGATGCCTGAAATGCTTCCTCTAATTGGAAAG
VPA0736_2F CAGGCATCGCAGTTCAAGTCGTGTGATGGTGATTGATGACC
VPA0736_2R CACTAGTGACGCGTACTCGACAAGCACCTCTCCACTTTG
VPA0763_1F GCTTATCGATACCGTCGACCCTCGAGCAGCTGCAATCATCCAAATC
VPA0763_1R CGACTTGAACTGCGATGCCTGGATAGGATTCCAAGAAATGACTTG
VPA0763_2F CAGGCATCGCAGTTCAAGTCGTAAAAGTAGTCATAGTGGAAGATG
VPA0763_2R CACTAGTGACGCGTACTCGACGGAACATAAAAGGATCTAAGC
VPA0920_1F GCTTATCGATACCGTCGACCCTCGAATGGTCTAGTAGTTCATCACG
VPA0920_1R CGACTTGAACTGCGATGCCTGGGACGATAAAAACTTGGCTG
VPA0920_2F CAGGCATCGCAGTTCAAGTCGACTGTTACCGTTACTTGTTTC
VPA0920_2R CACTAGTGACGCGTACTCGATCTGCCTGGTCACATGAACG
VPA0965_1F GCTTATCGATACCGTCGACCCTCGAAAGCACGCACAGGCTTGC
VPA0965_1R CGACTTGAACTGCGATGCCTGTAAAAGGACTCTTGAGAGAATAG
VPA0965_2F CAGGCATCGCAGTTCAAGTCGCTCAAGATGTTTGGATTTTTACG
VPA0965_2R CACTAGTGACGCGTACTCGAATAGGGATCAGAGCGCCAC
VPA1075_1F GCTTATCGATACCGTCGACCCTCGACAGATACCAAGGAACACGAG
VPA1075_1R CGACTTGAACTGCGATGCCTGCGTCCAAATTTGCCAATGAAG
VPA1075_2F CAGGCATCGCAGTTCAAGTCGGAATAGTCTCTAATCGTGATTC
VPA1075_2R CACTAGTGACGCGTACTCGACTGGCGTTGTTGGAAGATAAC
VPA1100_1F GCTTATCGATACCGTCGACCCTCGATTTTCATGCGCCATGTGGTG
VPA1100_1R CGACTTGAACTGCGATGCCTGAGTGGCTGTTCGCTCATTTC
VPA1100_2F CAGGCATCGCAGTTCAAGTCGTTTCCAGCACCTCTAAAATTAC
VPA1100_2R CACTAGTGACGCGTACTCGAGTTTAAACGCGCTGGAAACC
VPA1130_1F GCTTATCGATACCGTCGACCCTCGAATACGCTGTTTGATATGGGATG
VPA1130_1R CGACTTGAACTGCGATGCCTGTGCTTTTGTGAATCGTACTTGG
VPA1130_2F CAGGCATCGCAGTTCAAGTCGCGCCCACTTATCTCGAAATG
VPA1130_2R CACTAGTGACGCGTACTCGATATTACAGGGATTATTGTGGCG
VPA1277_1F GCTTATCGATACCGTCGACCCTCGAAGATTTGATGCTGCCGGGC
VPA1277_1R CGACTTGAACTGCGATGCCTGTTATGCGTTCCATGCATCCG
VPA1277_2F CAGGCATCGCAGTTCAAGTCGCGGGCGAACAACGATAAAAG
VPA1277_2R CACTAGTGACGCGTACTCGACGAGAGCTTGTGTTTTGGTG
VPA1433_1F GCTTATCGATACCGTCGACCCTCGAAGTTTTCCCGGCTTGAGAATC
VPA1433_1R CGACTTGAACTGCGATGCCTGGTTACAAAGTTTTAGTCGTGGAC
VPA1433_2F CAGGCATCGCAGTTCAAGTCGCCAAAATTCGATGCAGAAAC
VPA1433_2R CACTAGTGACGCGTACTCGATTGATCATGGACGAAGCAAC
VPA1515_1F GCTTATCGATACCGTCGACCCTCGATGCCGGACTACATGGCTTTC
VPA1515_1R CGACTTGAACTGCGATGCCTGGAAGTGTGAATCAGACAGATC
VPA1515_2F CAGGCATCGCAGTTCAAGTCGCCTATCGCCTCCTCACAC
VPA1515_2R CACTAGTGACGCGTACTCGATTGCGTCAACGGCAAGATTG
VPA1664_1F GCTTATCGATACCGTCGACCCTCGATTTTGCTCAGCAAGCTCCATG
VPA1664_1R CGACTTGAACTGCGATGCCTGGACTATGAACAAACTGGCATTC
VPA1664_2F CAGGCATCGCAGTTCAAGTCGAAGGGAGGGTTTGAAAGAAAG
VPA1664_2R CACTAGTGACGCGTACTCGACGATGCCGACCCGTTTGAAC
VP0362_1F GCTTATCGATACCGTCGACCCTCGAATTATGTTGCCTAAACTCGATGG
VP0362_1R CGACTTGAACTGCGATGCCTGGACTCTCTTCGAGTTTGTAGC
VP0362_2F CAGGCATCGCAGTTCAAGTCGAAGGCAAACCTTGGCTTGCC
VP0362_2R CACTAGTGACGCGTACTCGATTTGAAAGCAGTGGCCTGGC
VP0487_1F GCTTATCGATACCGTCGACCCTCGATTCTTCAGACTGCGTGGCTC
VP0487_1R CGACTTGAACTGCGATGCCTGTCACTACTCCATGGCACAAG
VP0487_2F CAGGCATCGCAGTTCAAGTCGCATGAAGAAACTTGCACCCG
VP0487_2R CACTAGTGACGCGTACTCGATGGTGACTTAGAAGACTAATTC
VP1069_1F GCTTATCGATACCGTCGACCCTCGAATCGTACAACATGGTAAGAGAG
VP1069_1R CGACTTGAACTGCGATGCCTGATCTGTAGACGAATCATTCCC
VP1069_2F CAGGCATCGCAGTTCAAGTCGTATACAGGTAAAAAAGCAGTCC
VP1069_2R CACTAGTGACGCGTACTCGACGGCATGACGAATACAAAATG
VP1201_1F GCTTATCGATACCGTCGACCCTCGAGCAGCAGCATCCACTATTAC
VP1201_1R CGACTTGAACTGCGATGCCTGCACCTACATCAAATGTTGTCC
VP1201_2F CAGGCATCGCAGTTCAAGTCGTCTTTGTCCACTTTATATCGTTG
VP1201_2R CACTAGTGACGCGTACTCGAATAGTGCGAAGCGAAACACAC
VP1211_1F GCTTATCGATACCGTCGACCCTCGATTCAGGCTTGTCCATTTGG
VP1211_1R CGACTTGAACTGCGATGCCTGAACGAATCACTAAAGACTCTTTTTC
VP1211_2F CAGGCATCGCAGTTCAAGTCGTCAGTTGATACCCTAAGCC
VP1211_2R CACTAGTGACGCGTACTCGAGACGCGATTGTGCTCGAC
VP1375_1F GCTTATCGATACCGTCGACCCTCGATCGCCTTATGTGGTGCTATTC
VP1375_1R CGACTTGAACTGCGATGCCTGTACATGTATTACCCAATATGCC
VP1375_2F CAGGCATCGCAGTTCAAGTCGAGAACCGTTGAATAAATGGCTG
VP1375_2R CACTAGTGACGCGTACTCGACGAAACAGAACGTGGCTGTG
VP1503_1F GCTTATCGATACCGTCGACCCTCGATACCGTTTAAACGTTCTGAAAATTG
VP1503_1R CGACTTGAACTGCGATGCCTGATCCCTCATCCTCAGAATCC
VP1503_2F CAGGCATCGCAGTTCAAGTCGCGTAAACCAACGCCAGTTCC
VP1503_2R CACTAGTGACGCGTACTCGATCATAAAGGTTGATTTACCACAAC
VP1712_1F GCTTATCGATACCGTCGACCCTCGAGCTTCACCAACAAACAAGTCG
VP1712_1R CGACTTGAACTGCGATGCCTGACATGGCAACGCGAGTGATG
VP1712_2F CAGGCATCGCAGTTCAAGTCGGGTACATCCTTACCGTTAACC
VP1712_2R CACTAGTGACGCGTACTCGACCAAATTGCCTGACTTCAATG
VP1735_1F GCTTATCGATACCGTCGACCCTCGAGCGTTCACTGCCGTAATTTTG
VP1735_1R CGACTTGAACTGCGATGCCTGGAATGTTTTTGATGGCGACG
VP1735_2F CAGGCATCGCAGTTCAAGTCGCGAAAAAAGACGACTAAAAAGG
VP1735_2R CACTAGTGACGCGTACTCGACAAGAATCCATAGCCCAGCG
VP1908_1F GCTTATCGATACCGTCGACCCTCGACGTCGCGATTTTCTTACTGC
VP1908_1R CGACTTGAACTGCGATGCCTGTGTGGTGATCGTCGATGATC
VP1908_2F CAGGCATCGCAGTTCAAGTCGCCTTCCCTCCATGAAACGC
VP1908_2R CACTAGTGACGCGTACTCGAGCGTTTACGTATACAGGCGG
VP1968_1F GCTTATCGATACCGTCGACCCTCGAGGTATGAGATTTTGCCCTTG
VP1968_1R CGACTTGAACTGCGATGCCTGGTTCATTCACCTGCGTATTTTG
VP1968_2F CAGGCATCGCAGTTCAAGTCGTTGGCATTAAAACTGCTTAACTG
VP1968_2R CACTAGTGACGCGTACTCGAGTGAATAGCTCAAGGGATTTG
VP1984_1F GCTTATCGATACCGTCGACCCTCGACATGCTGCCGCGCATGG
VP1984_1R CGACTTGAACTGCGATGCCTGGCACCCGGCTCCAAGC
VP1984_2F CAGGCATCGCAGTTCAAGTCGTTGCGATGCCGATTCCGACT
VP1984_2R CACTAGTGACGCGTACTCGATATTGTTGAGCAGATGGTGG
VP2010_1F GCTTATCGATACCGTCGACCCTCGAATTGCAATGCACAGCTCATCC
VP2010_1R CGACTTGAACTGCGATGCCTGCTAATCGGTATTTAGGAGCAG
VP2010_2F CAGGCATCGCAGTTCAAGTCGTCCTTGCAGATATTCTTGTTCAG
VP2010_2R CACTAGTGACGCGTACTCGAATTGGCGCTTGGTTTTCAATAC
VP2478_1F GCTTATCGATACCGTCGACCCTCGAACGGTTTGTCTGGTCGCG
VP2478_1R CGACTTGAACTGCGATGCCTG GGATAAGATTACAACTCGTAAAG
VP2478_2F CAGGCATCGCAGTTCAAGTCG ACCTCTCATAAAATACAAGCCTC
VP2478_2R CACTAGTGACGCGTACTCGA GCGCTGAAAGCGTTAATTAATC
VP2567_1F GCTTATCGATACCGTCGACCCTCGAGTCAATTGTTGGTCATAATTGAG
VP2567_1R CGACTTGAACTGCGATGCCTGGTTATCTAATTACATCGGAGTC
VP2567_2F CAGGCATCGCAGTTCAAGTCGGCATTCGGACTAAACTTCATAC
VP2567_2R CACTAGTGACGCGTACTCGAAGTCTGTGGCAGAGATGAAAG
VP2859_1F GCTTATCGATACCGTCGACCCTCGAGAAACGCTGAAGCGTCTGC
VP2859_1R CGACTTGAACTGCGATGCCTGTAATCCTCCTCAAGCAGCATATA
VP2859_2F CAGGCATCGCAGTTCAAGTCGCTCTACAAGATTTCAGTTGATAATG
VP2859_2R CACTAGTGACGCGTACTCGAGTCTTTGAACTTTTCGAAGTG
VP2874_1F GcttatcgataccgtcgaccctcgaCGGTTATTCCTGAAGCCGC
VP2874_1R CGACTTGAACTGCGATGCCTGCTTAGGTAAGTTGAACGCATG
VP2874_2F CAGGCATCGCAGTTCAAGTCGCCGATATCCTTTCTAGCTTTTC
VP2874_2R CACTAGTGACGCGTACTCGAGCGCACGCTGTTTATTGTTG
VPA0919_1F GCTTATCGATACCGTCGACCCTCGACAATTGGCGGAGGCAAGTAAAGA
VPA0919_1R CGACTTGAACTGCGATGCCTGCTGCTTGTTCCAGGCTTAC
VPA0919_2F CAGGCATCGCAGTTCAAGTCGACTGTAGATACCCACGTACTTC
VPA0919_2R CACTAGTGACGCGTACTCGAACTCATCAACCCAACGACG
VPA 0477_1F GCTTATCGATACCGTCGACCCTCGACACGGCGGCAATTATCATCC
VPA 0477_1R CGACTTGAACTGCGATGCCTGGCGTGGTGTTCTTCGTTCTT
VPA 0477_2F CAGGCATCGCAGTTCAAGTCGGAACTCGAGCAACCAAGCC
VPA 0477_2R CACTAGTGACGCGTACTCGAACAGTATCGAGCACCTGCTG
VPA0920_pMMB_F AGCTCGGTACCCGGGGATCCTCTAGTTGATTAAACAGTTTTTGCTCGG
VPA0920_pMMB_R TCTCATCCGCCAAAACAGCCAAGCTTCAACGAGAAGCAGTGTCTGTT
VPA0919_pMMB_F GGTACCCGGGGATCCTCTAGTAAGGAGGTAGGATAATAGTGAAACAGACACTGCTTC
VPA0919_pMMB_R TCTCATCCGCCAAAACAGCCAAGCTTTATGCTTTCATCTTGTAGCCTA
vpa0477_RBS_pMMB_F GGTACCCGGGGATCCTCTAGTAAGGAGGTAGGATAATAATGAAAAAGTTATTCCTGTTGG
vpa0477_pMMB_R TCCGCCAAAACAGCCAAGCTTTAACTTTCTTTGTAGTGCTCTA
VPA0920_pMMB_His_R TCTCATCCGCCAAAACAGCCAAGCTTCAATGGTGGTGGTGATGATGTACGAGAAGCAGTGTCTGTT
VPA0919_pMMB_His_R TCTCATCCGCCAAAACAGCCAAGCTTTAATGGTGGTGGTGATGATGATGTGCTTTCATCTTGTAGCCTA
VPA0920H286A_1R AGCCGTTAAGATCTGTAAGAC
VPA0920H286A_2F GTCTTACAGATCTTAACGCTGAGCTTCGAACGCC
VPA0919D51A_1R AGCTAGGATGACAAGATCCG
VPA0919D51A_2F CGGATCTTGTCATCCTAGCTCGCCAGCTACCTG
VPA0477_RT_F GCGACATGGACAGCGGCAA
VPA0477_RT_R AATCGGTCAAGTCGCGTTGC
secY_RT_F GGCATCATGCCGTATATTTCG
secY_RT_R GGCAATCCAGCAACAATACC
920SD_GST_FBamHI AACGGATCCCTACCAGAACGCATAGATACG
920SD_GST_RXhoI AACCTCGAGGTGATCTTCTACATCCCAAC
920L82A_1R CAGCGCAGCGAATACATGTC
920L82A_2F GACATGTATTCGCTGCGCTG
920P125A_1R CACGCAGGTGGCGGTACTTAC
920P125A_2F GTAAGTACCGCCACCTGCGTG
920L95A_1R CCTGCAATTACTGAACCTCTAG
920L95A_2F CTAGAGGTTCAGTAATTGCAGG