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. 2016 Jan 7;113(6):E735–E743. doi: 10.1073/pnas.1523838113

Table S2.

Adjusted nonsupervised orthologous groups (NOG) assignments used for functional analysis

Major functional category Simplified functional groups Original functional groups by eggNOG (number)
Metabolism [Q] Secondary metabolites biosynthesis, transport, and catabolism Q
[P] Inorganic ion transport and metabolism P, PT (6)
[I] Lipid transport and metabolism I, IJT (4), IKT (2), IM (1), IN (1), IO (1), IOTUV (1), IU (9)
[H] Coenzyme transport and metabolism H
[F] Nucleotide transport and metabolism F
[E] Amino acid transport and metabolism E, EG (1), EH (4), EI (2), EJ (1), ET (2), EU (1)
[G] Carbohydrate transport and metabolism G, CG (5)
[C] Energy production and conversion C, CD (3), CH (1), CO (5)
Cellular processes and signaling [O] Posttranslational modification, protein turnover, chaperones O, KOT (2), OU (2)
[U] Intracellular trafficking, secretion, and vesicular transport U, CU (3), KU (4), UZ (7)
[W] Extracellular structures W
[Z] Cytoskeleton Z
[N] Cell motility N, DN (1), NT (4), NTZ (1)
[M] Cell wall/membrane/envelope biogenesis M, MO (3), MOT (2), MU (1), MW (3)
[T] Signal transduction mechanisms T, IT (6), KT (5), TU (25), TUZ (2), TW (1), TZ (24)
[V] Defense mechanisms V, TV (25), VW (2)
[Y] Nuclear structure Y, UY (22)
[D] Cell cycle control, cell division, chromosome partitioning D, BD (2), BDL (1), BDLT (2), BDT (1), DO (12), DP (2), DT (5), DTUZ (1), DTZ (1), DU (3), DUZ (5), DZ (4)
Information storage and processing [B] Chromatin structure and dynamics B, BL (2), BT (3)
[L] Replication, recombination, and repair L
[K] Transcription K, AK (1), BK (12), DK (5), DKL (1), DKLT (2), JK (1), KL (2), KLO (1), KO (3)
[A] RNA processing and modification A, ABO (1), AT (2)
[J] Translation, ribosomal structure, and biogenesis J, JO (2), JT (2), JU (1)