Table 1.
Genes encoding virulence factors in Paenibacillus sp. strain VT 400
| CDS no. | Functional annotation | CDS no. | Functional annotation |
|---|---|---|---|
| Toxins or putative toxins | |||
| WP_017689222.1 | Hemolysin D | WP_047842244.1 | CD4+ T-cell-stimulating antigen |
| Degradative enzymes and adhesins | |||
| WP_047843127.1 | Cell adhesion protein | WP_047843815.1 | Peptidase M28 |
| WP_047841133.1 | Clp protease ClpX | WP_047844415.1 | Peptidase M15 |
| WP_047841161.1 | CAAX protease | WP_047840296.1 | Peptidase S9 |
| WP_047841788.1 | Zn-dependent protease | WP_047840642.1 | Peptidase S41 |
| WP_036605888.1 | Lon protease | WP_047840884.1 | Peptidase T |
| WP_047841635.1 | ATP-dependent protease | WP_047841004.1 | Peptidase C60 |
| WP_047842474.1 | Clp protease ATPase | WP_047842822.1 | Peptidase S8 |
| WP_047842474.1 | RIP metalloprotease RseP | WP_047843693.1 | Peptidase M20 |
| WP_047843793.1 | Zinc metalloprotease | WP_047841259.1 | Peptidase M4 |
| WP_047843449.1 | Alkaline serine protease | WP_047841848.1 | Peptidase C15 |
| WP_036611272.1 | O-sialoglycoprotein endopeptidase | WP_047844159.1 | Peptidase M22 |
| WP_047842657.1 | Oligoendopeptidase F | WP_047842036.1 | Peptidase A24 |
| WP_047842959.1 | Endoglucanase | WP_047842221.1 | Peptidase M56 |
| WP_047841916.1 | Chitinase | WP_047842221.1 | Oligopeptidase PepB |
| WP_047840281.1 | Aminopeptidase | WP_047842554.1 | Peptidase E |
| WP_047840267.1 | Methionine aminopeptidase | WP_047843428.1 | Peptidase M32 |
| WP_047844227.1 | Lysophospholipase | WP_047843333.1 | Peptidase M29 |
| WP_047843070.1 | Phospholipase D | WP_047843711.1 | Peptidase M1 |
| WP_047843459.1 | 5′-Nucleotidase | WP_047843711.1 | Peptidase M16 |
| WP_047841534.1 | GDSL family lipase | WP_036610857.1 | Urease subunit alpha ureC |
| WP_047842732.1 | d-alanyl-d-alanine carboxypeptidase | WP_047842024.1 | Urease subunit beta ureB |
| Flagella components | |||
| WP_036607291.1 | Flagellar motor protein MotA | WP_047842476.1 | Flagellar motor switch protein FliG |
| WP_036607292.1 | Flagellar motor protein MotB | WP_047842475.1 | Flagellar M-ring protein FliF |
| WP_047842487.1 | Flagellar biosynthesis protein FlhA | WP_047840678.1 | Flagellar synthesis anti-sigma-D factor |
| WP_047842482.1 | Flagellar basal body rod protein FlgG | WP_047840677.1 | Flagellar biosynthesis protein FlgN |
| WP_047843392.1 | Flagellar basal body P-ring biosynthesis protein FlgA | WP_047840676.1 | Flagellar hook protein FlgK |
| WP_047842488.1 | Flagellar GTP-binding protein | WP_047840675.1 | Flagellar hook protein FlgL |
| WP_047842486.1 | Flagellar biosynthesis protein FlhB | WP_047840661.1 | Flagellar biosynthesis protein FliS |
| WP_047842485.1 | Flagellar biosynthesis protein FliQ | WP_036609359.1 | Flagellar motor switch protein FliM |
| Chemotaxis | |||
| WP_047841047.1 | Chemotaxis protein CheY | WP_036605799.1 | Chemotaxis protein CheC |
| WP_047842491.1 | Chemotaxis protein CheA | WP_036606984.1 | Chemotaxis protein CheR |
| WP_025703561.1 | Chemotaxis protein CheW | WP_017689162.1 | Chemotaxis protein CheD |