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. 2016 Feb 1;20(2):55–62. doi: 10.1089/gtmb.2015.0264

Table 1.

Basic Information of Candidate SNPs

        MAF HWE   95% CI  
  SNP A1/A 2 CHR Case Control p OR Lower Upper p
 1 rs10430146 G/A 1 0.32 0.05 0.20 12.50 4.79 32.61 0.0001
 2 rs905965 G/A 2 0.51 0.17 0.45 6.17 2.87 13.28 0.0001
 3 rs376511 A/G 3 0.46 0.07 1.00 24.40 8.68 68.62 0.0001
 4 rs12629897 T/C 3 0.70 0.27 0.59 7.12 3.29 15.41 0.0001
 5 rs13086279 G/A 3 0.44 0.10 0.15 6.66 3.08 14.38 0.0001
 6 rs1846594 G/A 3 0.65 0.20 0.51 13.80 4.96 38.42 0.0001
 7 rs7632505 G/A 3 0.73 0.20 0.50 29.47 7.16 121.30 0.0001
 8 rs891666 A/T 3 0.43 0.11 0.59 7.26 3.22 16.35 0.0001
 9 rs2700474 C/G 3 0.43 0.12 0.60 7.48 3.24 17.25 0.0001
10 rs4266183 G/A 3 0.43 0.11 1.00 14.06 5.34 37.03 0.0001
11 rs831781 G/C 5 0.64 0.25 0.57 6.32 2.97 13.46 0.0001
12 rs331047 G/A 5 0.63 0.25 0.57 6.11 2.87 13.02 0.0001
13 rs6929018 T/C 6 0.54 0.18 0.72 7.69 3.33 17.76 0.0001
14 rs494238 G/A 6 0.51 0.15 0.68 6.28 2.98 13.23 0.0001
15 rs1859604 T/G 7 0.37 0.07 1.00 8.66 3.58 20.92 0.0001
16 rs10178082 T/A 7 0.79 0.16 1.00 18.09 6.56 49.92 0.0001
17 rs7863803 A/G 9 0.34 0.07 1.00 12.01 4.70 30.70 0.0001
18 rs2456672 C/T 10 0.63 0.26 1.00 8.67 3.41 22.02 0.0001
19 rs2851117 T/T 11 0.11 0.63 0.48 0.08 0.03 0.21 0.0001
20 rs7248 A/C 12 0.39 0.05 1.00 10.21 4.05 25.71 0.0001
21 rs11110833 G/A 12 0.56 0.20 0.51 8.47 3.50 20.49 0.0001
22 rs9528951 C/T 13 0.47 0.14 0.34 6.73 3.05 14.84 0.0001
23 rs9550256 A/T 13 0.65 0.22 1.00 6.29 3.09 12.80 0.0001
24 rs8017647 T/C 14 0.41 0.08 0.39 7.90 3.43 18.22 0.0001
25 rs8072266 C/T 17 0.36 0.09 1.00 10.08 4.11 24.70 0.0001
26 rs1006644 A/G 20 0.64 0.18 0.72 6.15 3.12 12.12 0.0001

SNP, single-nucleotide polymorphism; A1/A2, tested allele (minor allele by default); CHR, chromosome; OR, odds ratio; 95% CI lower, lower bound of 95% confidence interval for odds ratio; 95% CI upper, upper bound of 95% confidence interval for odds ratio; STAT, coefficient Wald statistic; HWE, Hardy–Weinberg equilibrium; HWEp, p-value for H–W; p, asymptotic p-value for Wald statistic.