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. 2016 Feb 22;7:127. doi: 10.3389/fmicb.2016.00127

Table 1.

Examples of gene annotations from a single control Acropora aspera virome (generated from five coral fragments), including those from Herpesviridae, the Nucleocytoplasmic Large DNA Viruses (NCLDVs), and Retroviridae.

Viral family annotation ENA Accession No. Contig coverage nt Size E-Value aa % Identity Viral genome similarity Gene annotation
Herpesviridae LT009377 6.43 511 2e – 44 52% Elephant endotheliotropic herpesvirus 6 Uracil DNA glycosylase
Herpesviridae LT009378 1.18 497 2e – 17 34% Gorilla lymphocryptovirus 2 DNA polymerase
NCLDV/Mega LT009379 2.5 635 2e – 11 28% Pyramimonas orientalis virus MutS protein
NCLDV/Mega LT009380 1.34 321 4e – 53 64% Lausannevirus Eukaryotic peptide chain release factor subunit 1
NCLDV/Mega LT009381 2 907 2e – 08 30% Acanthamoeba polyphaga mimivirus Putative serine/threonine-protein kinase/receptor
NCLDV/Mega LT009382 5.1 896 1e – 34 36% Megavirus chilensis UDP-N-acetylglucosamine 2-epimerase
NCLDV/Mega LT009383 1.94 736 2e – 10 49% Cafeteria roenbergensis virus BV-PW1 Superfamily II helicase/eIF-4AIII
NCLDV/Mega LT009384 2.45 751 2e – 22 45% Cafeteria roenbergensis virus BV-PW1 Putative photolyase
NCLDV/Mega LT009385 1.58 259 7e – 21 67% Cafeteria roenbergensis virus BV-PW1 Putative DnaK/Hsp70
NCLDV/Phyco LT009386 2.37 1209 3e – 13 31% Bathycoccus sp. RCC1105 virus UDP-N-acetylglucosamine O-acyltransferase
NCLDV/Phyco LT009387 5.75 720 7e – 09 47% Paramecium bursaria Chlorella virus ATP-dependent helicase
NCLDV/Pox LT009388 1.76 880 3e – 09 31% Pigeonpox virus Hypothetical protein fep_013
Retroviridae LT009389 1.1 666 3e – 07 26% Walleye epidermal hyperplasia virus 1 RT_ZFREV_like reverse transcriptases
Retroviridae LT009390 2.38 474 6e – 19 40% Walleye epidermal hyperplasia virus 2 Polymerase protein
Retroviridae LT009391 4.7 856 5e – 15 32% Reticuloendotheliosis virus gag protein
Retroviridae LT009392 3.2 474 6e – 13 46% Reticuloendotheliosis virus Envelope glycoprotein
Retroviridae LT009393 4.86 461 2e – 14 48% Reticuloendotheliosis virus Protease
Retroviridae LT009394 2.18 466 2e – 11 28% Simian foamy virus Integrase core domain

Annotations are based on tBLASTx to the NCBI viral database (e-value threshold of <10–7). Contig sequences can be obtained through the European Nucleotide Archive (ENA).