Table 1. Genomic regions for loin peak shear force (PSF) detected by Bayes B analysis.
Population | Regions (SSC and position (Mb)) | 1st SNP | Last SNP | No. of SNPs | % GenVara | % PheVarb |
---|---|---|---|---|---|---|
Population 1 | 2_5 | ASGA0008585 | M1GA0002408 | 27 | 7.24 | 2.75 |
2_27 | MARC0035544 | MARC0094546 | 37 | 1.36 | 0.52 | |
Population 2 | 2_106 | ALGA0116861 | MARC0042944 | 16 | 3.04 | 0.77 |
2_109 | DRGA0003276 | ASGA0011111 | 20 | 1.27 | 0.32 | |
Combined data | 2_4 | ALGA0011480 | ASGA0008575 | 11 | 2.26 | 0.45 |
2_5 | ASGA0008585 | M1GA0002408 | 26 | 4.88 | 0.98 | |
2_109 | DRGA0003276 | ASGA0011111 | 17 | 6.53 | 1.31 | |
17_20 | ALGA0093561 | ASGA0075660 | 18 | 1.63 | 0.33 |
a: percentage of the total marker genetic variance explained by each region.
b: percentage of the total phenotypic variance explained by each region, which was calculated as the percentage of genetic variance (% GenVar) multiplied by molecular heritability (the percentage of the whole phenotypic variance explained by the fitted SNPs).