Table 1. Deduced amino acid sequences of the CVVI-49/2010 and CVVI-50/2014 strains relative to genetically related strains.
Strains | HA | NS | M1 | PB2 | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cleavage site | Glycosylation site | Receptor binding site | Amino acids position | C-terminal | Amino acid position | |||||||||
323–332 | 140–142 | 154–156 | 222 | 224 | 80–84 | 42 | 92 | 149 | 30 | 215 | 627 | 701 | ||
A/quail/Vietnam/CVVI-49/2010 | REGRRKKR/G | KSS | NST | Q | G | Deletion | S | D | A | ESEV | D | A | E | D |
A/quail/Vietnam/CVVI-50/2014 | RERRRK—R/G | NSS | DNA | Q | G | Deletion | S | E | A | ESEV | D | A | E | D |
A/goose/Guangdong/1/1996 | RERRRKKR/G | RSS | NSA | Q | G | No deletion | A | D | A | ESEV | D | A | E | D |
A/Dk/HK/821/02 | IERRRKKR/G | KSS | NSA | Q | G | Deletion | S | D | A | ESEV | D | A | E | D |
A/quail/Vietnam/36/2004 | RERRRKKR/G | KSS | NST | Q | G | Deletion | S | D | A | ESEV | D | A | E | D |
A/quail/Vietnam/177/2004 | RERRRKKR/G | KSS | NST | Q | G | Deletion | S | D | A | ESEV | D | A | E | D |
A/quail/Vietnam/TG-007B/2004 | RERRRKKR/G | KSS | NST | Q | G | Deletion | S | D | A | EPEV | D | A | E | D |
A/quail/Vietnam/15/2005 | RERRRK—R/G | KSS | NDA | Q | G | Deletion | S | D | A | ESEV | D | A | E | D |
A/quail/Vietnam/282/2005 | RERRRKKR/G | KSS | NST | Q | G | Deletion | S | D | A | ESEV | D | A | E | D |
A/Cambodia/R0405050/2007 | REGRRKKR/G | KSS | NNS | Q | G | Deletion | S | D | A | ESEV | D | A | E | D |
A/Cambodia/S1211394/2008 | REGRRKKR/G | KSS | NST | Q | G | Deletion | S | D | A | ESEV | D | A | E | D |
A/Hubei/1/2010 | RERRRK—R/G | KSS | DNA | Q | G | Deletion | S | D | A | ESEV | D | A | E | D |
A/Hong Kong/6841/2010 | RERRRK—R/G | NSS | DNA | Q | G | Deletion | S | D | A | ESEV | D | A | E | D |
A/barn swallow/HongKong/1161/2010 | IERRRKKR/G | NSS | DNA | Q | G | Deletion | S | E | A | ESEV | D | A | E | D |
*HA-Haemagglutinin, NS-Non-structural proteins, M1-Matrix protein M1, and PB2-Polymerase PB2. A-Alanine, D-Aspartic acid, E-Glutamic acid, G-Glycine, I-Isoleucine, K-Lysine, N-Asparagine, Q-Glutamine, R-Arginine, S-Serine, T-Threonine, V-Valine.