Table 1. Assembly statistics for M. hansupus.
Organism name | Myxococcus hansupus |
---|---|
Sequencing data | PacBio P6C4 chemistry sequencing |
Total Reads | 145,073 |
Number of Bases | 1,556,757,303 bp |
Mean Read Length | 10,730 bp |
Average Reference Coverage | 138.05 X |
Bio-Project Number | PRJNA167109 |
NCBI Accession number | CP012109 |
Genome size | 9,490,432 bp |
GC content | 69.2% |
Chromosome | 1 |
CDS | 7,753 |
% Coding density | 88.87 |
CDS from (+) strand | 3,909 |
CDS from (-) strand | 3,844 |
Max. CDS length | 32,543 bp |
Mean CDS length | 1,088 bp |
Hypothetical proteins | 2,800 |
Hypothetical proteins % | 36.11 |
tRNA | 79 |
Genes with Pfam domains | 5,409 (69.77%) |
Genes with COG domains | 5,650 (72.88%) |
Genes with TIGR domains | 3,686 (47.54%) |