Table 2.
Steady-state kinetic parameters and product binding kinetics of native (l-DHFR) and heavy (h-DHFR) hsDHFR at pH 7.65 and 25 °Ca,b
l-DHFR | h-DHFR | h-KIE | |
---|---|---|---|
kcatDHF, (s−1) | 14.03 ± 0.02 | 9.77 ± 0.12 | 1.44 ± 0.02 |
KmDHF, (μM) | 0.29 ± 0.05 | 0.27 ± 0.09 | 1.07 ± 0.40 |
(kcat/Km)DHF × 107 (M−1s−1) | 4.84 ± 0.83 | 3.62 ± 1.20 | 1.34 ± 0.50 |
konTHF × 10−6(M−1s−1) | 38.7 ± 1.8 | 38.5 ± 0.5 | 1.01 ± 0.05 |
koffTHF, (s−1) | 110 ± 10 | 80 ± 5 | 1.38 ± 0.13 |
| |||
kcatNADPH, (s−1) | 14.10 ± 0.01 | 9.75 ± 0.11 | 1.45 ± 0.02 |
KmNADPH, (μM) | 0.36 ± 0.05 | 0.34 ± 0.07 | 1.06 ± 0.26 |
(kcat/Km)NADPH × 107 (M−1s−1) | 3.92 ± 0.54 | 2.87 ± 0.59 | 1.37 ± 0.34 |
konNADP × 10−6 (M−1s−1) | 1.19 ± 0.05 | 1.26 ± 0.05 | 0.94 ± 0.06 |
koffNADP, (s−1) | 140 ± 1 | 140 ± 1 | 1.00 ± 0.01 |
kcatDHF and KmDHF are the turnover number and Michaelis constant with DHF as substrate measured in the presence of 100 μM NADPH and varying concentrations of DHF
kcatNADPH and KmNADPH are the turnover number and Michaelis constant with NADPH as substrate, measured in the presence of 100 μM DHF and varying concentrations of NADPH.
h-KIE is the heavy enzyme KIE, calculated by taking the ratio between the kinetic parameter of l-DHFR and the same parameter of h-DHFR.