Table 2.
Sequencing summary
DWS− A | DWS− Pc | DWS+ A | DWS+ Pc | |||||
---|---|---|---|---|---|---|---|---|
Total | Media ± SD | Total | Media ± SD | Total | Media ± SD | Total | Media ± SD | |
Raw sequences | 731,977 | 73,197 ± 25,500 | 460,685 | 65,812 ± 23,151 | 594,743 | 66,082 ± 27,433 | 260,066 | 65,016 ± 47,798 |
Pass filters sequences | 659,621 | 65,962 ± 23,636 | 395,217 | 56,459 ± 22,634 | 499,483 | 55,498 ± 25,926 | 227,017 | 56,754 ± 44,401 |
Heavy chain clonotypes (unique) | 49,616 | 4961 ± 2590 | 19,260 | 2751 ± 858 | 53,573 | 5952 ± 4027 | 10,144 | 2536 ± 806 |
Heavy chains lineages (unique) | 125,631 | 12,563 ± 5334 | 60,708 | 8672 ± 5687 | 129,040 | 14,337 ± 8620 | 31,213 | 7803 ± 2534 |
A acute, DWS− dengue without warning signs; DWS+ dengue with warning signs; NA not applicable, Pc post-convalescence, SD standard deviation; media and SD was calculated by the number of individuals in each group