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. 2016 Feb 22;11(2):e0149284. doi: 10.1371/journal.pone.0149284

Table 2. Molecular identification of the strains used in this study, including the percentual of identity, accession number and the name of the identified species on the Barcode of Life Database (based on rbcL marker sequence) and GenBank (based on nuITS2 marker sequence).

Strain ITS1 (GenBank) ITS2 (GenBank) rbcL (BOLD)
Closest match species Identity GenBank access Closest match species Identity Number of CBCs / hCBCs GenBank access Closest match species Identity GenBank access
LBA#1 Desmodesmus armatus 95% KP281288.1 Desmodesmus bicellularis 91% 1 / 7 AB917134.1 Scenedesmus quadricauda 90% AB084332.1
LBA#2 Desmodesmus sp. MAT-2008c 100% EU502836.1 Desmodesmus sp. MAT-2008c 100% 0 / 0 EU502836.1 Acutodesmus obliquus 93% DQ396875.1
LBA#3 Desmodesmus sp. MAT-2008c 100% EU502836.1 Desmodesmus sp. MAT-2008c 100% 0 / 0 EU502836.1 Acutodesmus obliquus 90% DQ396875.1
LBA#4 Chlamydopodium starrii 70% AB983644.1 Chlorococcum oleofaciens 91% 1 / 2 AB983633.1 Chlorococcum ellipsoideum 91% EF113431.1
LBA#5 Desmodesmus sp. Tow 10/11 T-12W 79% DQ417556.1 Desmodesmus regularis 84% 4 / 2 AM228924.1 Desmodesmus santosii 93% GU192417.1
LBA#6 Chlamydopodium starrii 70% AB983644.1 Chlorococcum oleofaciens 94% - AB983633.1 Chlorococcum ellipsoideum 91% EF113431.1
LBA#7 Desmodesmus sp. Tow 10/11 T-12W 79% DQ417556.1 Desmodesmus regularis 84% 4 / 2 AM228924.1 Desmodesmus santosii 93% GU192417.1
LBA#8 Chlamydomonas sp. KU107 94% KM061447.1 Chlamydomonas sp. KU107 87% 0 / 1 KM061447.1 Chlamydomonas oblonga 95% EF113424.1
LBA#9 Chlamydopodium starrii 90% AB983644.1 Chlamydopodium starrii 93% 0 / 1 AB983644.1 Chlorococcum ellipsoideum 92% KC810301.1
LBA#10 Chlamydopodium starrii 90% AB983644.1 Chlamydopodium starrii 93% 0 / 1 AB983644.1 Chlorococcum ellipsoideum 92% KC810301.1
LBA#11 Chlamydopodium starrii 90% AB983644.1 Chlamydopodium starrii 93% 0 / 1 AB983644.1 Chlorococcum ellipsoideum 92% KC810301.1
LBA#12 Chlamydopodium starrii 90% AB983644.1 Chlamydopodium starrii 93% 0 / 1 AB983644.1 -  -
LBA#13 Coelastrella sp. shy-188 96% KP702302.1 Scenedesmus rubescens 95% 0 / 2 JX513884.1 Scenedesmus quadricauda 90% AB084332.1
LBA#14 Chlamydopodium starrii 90% AB983644.1 Chlamydopodium starrii 93% 0 / 1 AB983644.1 Chlorococcum ellipsoideum 92% KC810301.1
LBA#15 Chlamydopodium starrii 90% AB983644.1 Chlamydopodium starrii 93% 0 / 1 AB983644.1 Chlorococcum ellipsoideum 92% KC810301.1
LBA#16 - - - - - - - Ecballocystopsis dichotomus 90% JX018187.1
LBA#17 Chlamydopodium starrii 90% AB983644.1 Chlamydopodium starrii 93% 0 / 1 AB983644.1 Chlorococcum ellipsoideum 92% KC810301.1
LBA#18 Chlamydopodium starrii 90% AB983644.1 Chlamydopodium starrii 93% 0 / 1 AB983644.1 Chlorococcum ellipsoideum 92% KC810301.1
LBA#19 - - - - - - - Ecballocystopsis dichotomus 90% JX018187.1
LBA#20 Coelastrum astroideum 76% GQ375093.1 Scenedesmus arcuatus 81% 0 / 6 AY170855.1 Hariotina reticulata 93% JQ394815.1
LBA#21 Coelastrella sp. shy-188 96% KP702302.1 Scenedesmus rubescens 95% 0 / 2 JX513884.1 Desmodesmus costato-granulatus 94% GU192427.1
LBA#22 Desmodesmus ultrasquamatus 100% GU192392.1 Desmodesmus ultrasquamatus 99% 0 / 0 GU192392.1 Desmodesmus costato-granulatus 93% GU192427.1
LBA#23 Desmodesmus ultrasquamatus 100% GU192392.1 Desmodesmus ultrasquamatus 99% 0 / 0 GU192392.1 Desmodesmus costato-granulatus 94% GU192427.1
LBA#24 Desmodesmus ultrasquamatus 94% GU192392.1 Desmodesmus ultrasquamatus 94% 0 / 3 AM228926.1 Desmodesmus costato-granulatus 94% GU192427.1
LBA#25 Desmodesmus ultrasquamatus 94% GU192392.1 Desmodesmus ultrasquamatus 94% 0 / 3 AM228926.1 Desmodesmus costato-granulatus 94% GU192427.1
LBA#26 Desmodesmus sp. MAT-2008c 100% EU502836.1 Desmodesmus sp. MAT-2008c 100% 0 / 0 EU502836.1 Acutodesmus obliquus 92% DQ396875.1
LBA#27 Chlorella sorokiniana 100% KM061456.1 Chlorella sorokiniana 100% 0 / 0 KJ676113.1 Chlorella sorokiniana 99% HM101339.1
LBA#28 - - - - - - - Selenastrum sp. KMMCC 1456 94% JQ315488.1
LBA#29 Chlorella sp. MAT-2008a 92% EU502833.1 Chlorella sp. MAT-2008a 91% 0 / 2 EU502833.1 Chlorella sp. IFRPD 1018 93% AB260911.1
LBA#30 Desmodesmus sp. MAT-2008c 100% EU502836.1 Desmodesmus sp. MAT-2008c 100% 0 / 0 EU502836.1 Acutodesmus obliquus 93% DQ396875.1
LBA#31 Chlorella sp. MAT-2008a 92% EU502833.1 Chlorella sp. MAT-2008ª 91% 0 / 2 EU502833.1 Chlorella sp. IFRPD 1018 93% AB260911.1
LBA#32 Micractinium sp. CCAP 211/92 99% FM205863.1 Micractinium sp. CCAP 211/92 100% 0 / 0 FM205863.1 Chlorella pyrenoidosa 99% FM205863.1
LBA#33 Micractinium sp. CCAP 211/92 99% FM205863.1 Micractinium sp. CCAP 211/92 100% 0 / 0 FM205863.1 Chlorella pyrenoidosa 99% FM205863.1
LBA#34 Micractinium sp. CCAP 211/92 99% FM205863.1 Micractinium sp. CCAP 211/92 100% 0 / 0 FM205863.1 Chlorella pyrenoidosa 99% FM205863.1
LBA#35 Desmodesmus sp. GM4a 100% AB917128.1 Desmodesmus sp. GM4a 99% 0 / 1 AB917128.1 Desmodesmus baconii 93% KC315289.1
LBA#36 Desmodesmus sp. MAT-2008c 100% EU502836.1 Desmodesmus sp. MAT-2008c 100% 0 / 0 EU502836.1 Acutodesmus obliquus 93% DQ396875.1
LBA#37 Chlamydomonas sp. YB3-2 90% JN862852.1 Chlamydomonas applanata 92% 1 / 2 FR865616.1 Ascochloris multinucleata 94% EF113411.1
LBA#38 Chlamydomonas sp. YB3-2 90% JN862852.1 Chlamydomonas applanata 92% 1 / 2 FR865616.1 Ascochloris multinucleata 94% EF113411.1
LBA#39 Chlorella sorokiniana KU207 100% KM061456.1 Chlorella sorokiniana 100% 0 / 0 KJ676113.1 Chlorella sorokiniana 99% HM101339.1
LBA#40 Chlamydomonas zebra 79% AF033294.1 Chlamydomonas sp. XJU-36 95% 2 / 0 FJ572059.1 Chlamydomonas orbicularis 96% AB511849.1
LBA#41 Chlamydomonas sp. KU107 94% KM061447.1 Chlamydomonas sp. KU107 87% 0 / 3 KM061447.1 Chlamydomonas oblonga 95% EF113424.1
LBA#42 Micractinium sp. CCAP 211/92 99% FM205863.1 Micractinium sp. CCAP 211/92 100% 0 / 0 FM205863.1 Chlorella pyrenoidosa 99% FM205863.1
LBA#43 Micractinium sp. CCAP 211/92 99% FM205863.1 Micractinium sp. CCAP 211/92 100% 0 / 0 FM205863.1 Chlorella pyrenoidosa 99% FM205863.1
LBA#44 Micractinium sp. CCAP 211/92 99% FM205863.1 Micractinium sp. CCAP 211/92 100% 0 / 0 FM205863.1 Chlorella pyrenoidosa 99% FM205863.1
LBA#45 Chlorococcum oleofaciens 82% AB983633.1 Spongiochloris spongiosa 86% - U34776.1 Protosiphon botryoides 92% EF113465.1
LBA#46 Uronema sp. AF-2012 98% JX092263.1 Uronema trentonense 100% 0 / 0 HF920659.1 - - -
LBA#47 Tetracystis tetraspora 95% KM020024.1 Dunaliella sp. SPMO 300–4 85% 2 / 0 DQ377118.1 Nautococcus solutus 91% AB360758.1
LBA#48 - - - - - - - Gungnir sp. NIES-1851 93% AB603749.1
LBA#49 Lobochlamys segnis 83% FR865604.1 Chlamydomonas sp. CCAP 11/150 90% 0 / 1 FR865545.1 Asterococcus korschikoffii 90% AB175944.1
LBA#50 Chlorella sp. KMMCC 1468 99% JQ315774.1 Chlorella sorokiniana 96% 0 / 0 LK021940.1 Chlorella sp. IFRPD 1014 99% AB260910.1
LBA#51 Chlorococcum oleofaciens 74% AB983630.1 Chlorococcum sp. CCAP 11/52 84% 2 / 1 FR865591.1 Chlamydopodium vacuolatum 95% EF113426.1

The compensatory and hemi-compensatory base changes (CBCs/hemi-CBCs) between the indicated sequence and its closest match in the ITS2 Database are shown. An hyphen (-) is indicated for samples that could not be amplified and/or sequenced, and for the nuITS2 sequences for which secondary structure predictions and CBCs/Hemi-CBCs analysis were not possible.