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. Author manuscript; available in PMC: 2016 Feb 25.
Published in final edited form as: J Chem Theory Comput. 2007 Nov;3(6):2083–2097. doi: 10.1021/ct7001336

Table 5.

The total dipole moment (Debye) for 55 proteins in vacuum and within the PMPB and GK continuum models. The signed and unsigned relative difference of the GK model to PMPB is given along with their reaction field factors.

Dipole Moment % Difference Reaction Field Factor



Vacuum PMPB GK Signed Unsigned PMPB GK
1A6M 191.5 252.1 242.6 −3.7 3.7 1.32 1.27
1AHO 119.3 143.6 142.6 −0.7 0.7 1.20 1.20
1BYI 295.8 357.4 343.1 −4.0 4.0 1.21 1.16
1C75 125.0 167.2 165.7 −0.9 0.9 1.34 1.33
1C7K 229.3 310.3 302.7 −2.4 2.4 1.35 1.32
1CEX 451.0 599.7 574.3 −4.2 4.2 1.33 1.27
1EB6 217.9 281.0 274.6 −2.3 2.3 1.29 1.26
1EJG 37.4 49.0 48.9 −0.3 0.3 1.31 1.31
1ETL 29.3 42.9 41.2 −3.8 3.8 1.46 1.41
1EXR 352.5 395.6 384.2 −2.9 2.9 1.12 1.09
1F94 90.7 116.7 113.0 −3.2 3.2 1.29 1.25
1F9Y 138.4 166.0 161.9 −2.5 2.5 1.20 1.17
1G4I 87.9 102.1 97.9 −4.1 4.1 1.16 1.11
1G66 226.5 279.9 273.5 −2.3 2.3 1.24 1.21
1GQV 314.6 394.5 385.2 −2.4 2.4 1.25 1.22
1HJE 48.3 61.2 60.4 −1.4 1.4 1.27 1.25
1IQZ 86.1 110.7 107.2 −3.1 3.1 1.29 1.25
1IUA 107.5 146.1 141.5 −3.2 3.2 1.36 1.32
1J0P 105.2 148.7 142.3 −4.3 4.3 1.41 1.35
1K4I 130.1 163.0 159.6 −2.1 2.1 1.25 1.23
1KTH 117.1 152.1 148.9 −2.1 2.1 1.30 1.27
1L9L 422.8 525.9 517.0 −1.7 1.7 1.24 1.22
1M1Q 261.7 318.1 311.2 −2.2 2.2 1.22 1.19
1NLS 244.9 331.8 313.0 −5.7 5.7 1.35 1.28
1NWZ 83.2 130.2 126.9 −2.5 2.5 1.56 1.53
1OD3 115.2 165.9 160.9 −3.0 3.0 1.44 1.40
1OK0 149.4 193.7 189.1 −2.4 2.4 1.30 1.27
1P9G 17.7 14.6 13.0 −10.7 10.7 0.82 0.74
1PQ7 46.4 49.6 49.1 −1.1 1.1 1.07 1.06
1R6J 86.8 108.8 106.7 −1.9 1.9 1.25 1.23
1SSX 66.0 93.8 89.9 −4.2 4.2 1.42 1.36
1TG0 236.9 316.8 311.1 −1.8 1.8 1.34 1.31
1TQG 355.4 489.5 477.3 −2.5 2.5 1.38 1.34
1TT8 339.6 450.3 434.3 −3.6 3.6 1.33 1.28
1U2H 157.1 206.0 200.6 −2.6 2.6 1.31 1.28
1UCS 111.1 133.0 132.9 0.0 0.0 1.20 1.20
1UFY 94.0 105.9 102.3 −3.4 3.4 1.13 1.09
1UNQ 601.1 735.2 718.8 −2.2 2.2 1.22 1.20
1VB0 132.2 158.2 155.0 −2.0 2.0 1.20 1.17
1VBW 94.4 117.0 114.0 −2.6 2.6 1.24 1.21
1W0N 114.9 155.4 150.0 −3.5 3.5 1.35 1.31
1WY3 63.7 96.4 93.6 −3.0 3.0 1.51 1.47
1X6Z 294.2 366.7 355.9 −2.9 2.9 1.25 1.21
1X8Q 183.8 244.2 237.6 −2.7 2.7 1.33 1.29
1XMK 272.8 356.1 347.0 −2.6 2.6 1.31 1.27
1YK4 66.1 83.7 83.6 −0.2 0.2 1.27 1.26
1ZZK 195.2 246.5 241.6 −2.0 2.0 1.26 1.24
2A6Z 84.1 105.0 101.4 −3.4 3.4 1.25 1.21
2BF9 255.7 290.6 288.4 −0.7 0.7 1.14 1.13
2CHH 267.4 335.7 329.2 −1.9 1.9 1.26 1.23
2CWS 168.6 220.5 211.0 −4.3 4.3 1.31 1.25
2ERL 81.2 108.1 105.6 −2.3 2.3 1.33 1.30
2FDN 78.3 93.2 93.4 0.3 0.3 1.19 1.19
2FWH 104.9 146.3 142.9 −2.3 2.3 1.39 1.36
3LZT 178.5 214.6 209.8 −2.3 2.3 1.20 1.18

Mean 173.2 220.9 215.0 −2.7 2.7 1.28 1.24