Table 3.
KEGG pathway enrichment for succinylated proteinsa in the glutamate‐producing condition
| Termb | KEGG pathway | Countc | %d | Detected proteome backgrounde | Entire proteome backgroundf | |||
|---|---|---|---|---|---|---|---|---|
| P‐value | Fold enrichment | P‐value | Fold enrichment | Bonferroni | ||||
| cgl03010 | Ribosome | 28 | 19.6 | 1.75E‐09 | 3.0 | 7.60E‐20 | 8.6 | 8.67E‐18 |
| cgl00020 | Citrate cycle (TCA cycle) | 10 | 7.0 | 6.33E‐04 | 3.6 | 2.31E‐08 | 11.9 | 2.63E‐06 |
a
143 proteins that contain reproducible succinylation sites were used.
b
Kyoto Encyclopedia of Genes and Genome pathway (KEGG) pathway term.
c
Number of genes matching a given KEGG pathway term.
d
Percentage of genes matching a given term divided by the total number of input genes.
e
The detected proteome (1181 proteins) was used as background (P‐value < 0.01).
f
The entire proteome of Corynebacterium glutamicum was used as background.