Table 4.
Functional classification of 627 proteinsa with reduced abundance in the glutamate‐producing condition
| Termb | KEGG pathway | Countc | %d | Fold enrichmente | P‐valuee | Bonferronie |
|---|---|---|---|---|---|---|
| cgl00190 | Oxidative phosphorylation | 15 | 2.4 | 5.9 | 7.75E‐09 | 1.26E‐06 |
| cgl00730 | Thiamine metabolism | 10 | 1.6 | 7.6 | 3.11E‐07 | 5.07E‐05 |
| cgl02020 | Two‐component system | 14 | 2.2 | 3.8 | 2.54E‐05 | 0.00 413 |
| cgl03070 | Bacterial secretion system | 9 | 1.4 | 5.1 | 1.06E‐04 | 0.0171 |
| cgl00910 | Nitrogen metabolism | 9 | 1.4 | 4.6 | 2.95E‐04 | 0.0470 |
| cgl03060 | Protein export | 9 | 1.4 | 4.6 | 2.95E‐04 | 0.0470 |
| cgl00020 | Citrate cycle (TCA cycle) | 9 | 1.4 | 4.6 | 2.95E‐04 | 0.0470 |
| cgl00010 | Glycolysis/Gluconeogenesis | 12 | 1.9 | 3.4 | 3.31E‐04 | 0.0525 |
| cgl00030 | Pentose phosphate pathway | 9 | 1.4 | 4.3 | 4.62E‐04 | 0.0726 |
| cgl00290 | Valine, leucine and isoleucine biosynthesis | 8 | 1.3 | 4.9 | 5.03E‐04 | 0.0787 |
| cgl00260 | Glycine, serine and threonine metabolism | 9 | 1.4 | 4.1 | 6.99E‐04 | 0.108 |
| cgl00400 | Phenylalanine, tyrosine and tryptophan biosynthesis | 9 | 1.4 | 4.1 | 6.99E‐04 | 0.108 |
| cgl00240 | Pyrimidine metabolism | 12 | 1.9 | 2.7 | 0.00 267 | 0.354 |
| cgl00620 | Pyruvate metabolism | 9 | 1.4 | 3.0 | 0.00 625 | 0.640 |
| cgl00860 | Porphyrin and chlorophyll metabolism | 8 | 1.3 | 3.3 | 0.00 681 | 0.672 |
a
Proteins that were not expressed (266 proteins) or occured at only half the abundance or less (361 proteins) in the glutamate‐producing conditions are included.
b
Kyoto Encyclopedia of Genes and Genome pathway (KEGG) pathway term.
c
Number of genes matching a given KEGG pathway term.
d
Percentage of genes matching a given term divided by the total number of input genes.
e
The entire proteome of Corynebacterium glutamicum was used as background (P‐value < 0.01).