Table 4.
Termb | KEGG pathway | Countc | %d | Fold enrichmente | P‐valuee | Bonferronie |
---|---|---|---|---|---|---|
cgl00190 | Oxidative phosphorylation | 15 | 2.4 | 5.9 | 7.75E‐09 | 1.26E‐06 |
cgl00730 | Thiamine metabolism | 10 | 1.6 | 7.6 | 3.11E‐07 | 5.07E‐05 |
cgl02020 | Two‐component system | 14 | 2.2 | 3.8 | 2.54E‐05 | 0.00 413 |
cgl03070 | Bacterial secretion system | 9 | 1.4 | 5.1 | 1.06E‐04 | 0.0171 |
cgl00910 | Nitrogen metabolism | 9 | 1.4 | 4.6 | 2.95E‐04 | 0.0470 |
cgl03060 | Protein export | 9 | 1.4 | 4.6 | 2.95E‐04 | 0.0470 |
cgl00020 | Citrate cycle (TCA cycle) | 9 | 1.4 | 4.6 | 2.95E‐04 | 0.0470 |
cgl00010 | Glycolysis/Gluconeogenesis | 12 | 1.9 | 3.4 | 3.31E‐04 | 0.0525 |
cgl00030 | Pentose phosphate pathway | 9 | 1.4 | 4.3 | 4.62E‐04 | 0.0726 |
cgl00290 | Valine, leucine and isoleucine biosynthesis | 8 | 1.3 | 4.9 | 5.03E‐04 | 0.0787 |
cgl00260 | Glycine, serine and threonine metabolism | 9 | 1.4 | 4.1 | 6.99E‐04 | 0.108 |
cgl00400 | Phenylalanine, tyrosine and tryptophan biosynthesis | 9 | 1.4 | 4.1 | 6.99E‐04 | 0.108 |
cgl00240 | Pyrimidine metabolism | 12 | 1.9 | 2.7 | 0.00 267 | 0.354 |
cgl00620 | Pyruvate metabolism | 9 | 1.4 | 3.0 | 0.00 625 | 0.640 |
cgl00860 | Porphyrin and chlorophyll metabolism | 8 | 1.3 | 3.3 | 0.00 681 | 0.672 |
Proteins that were not expressed (266 proteins) or occured at only half the abundance or less (361 proteins) in the glutamate‐producing conditions are included.
Kyoto Encyclopedia of Genes and Genome pathway (KEGG) pathway term.
Number of genes matching a given KEGG pathway term.
Percentage of genes matching a given term divided by the total number of input genes.
The entire proteome of Corynebacterium glutamicum was used as background (P‐value < 0.01).