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. 2016 Mar 9;5:99. Originally published 2016 Jan 22. [Version 2] doi: 10.12688/f1000research.7656.2

Table 3. Checklist of tests to conduct when designing RT-qPCR studies.

Checklist Suggested Test
Correct reference genes Test a panel of candidate reference genes using Normfinder
Efficiency of primer
assays
Conduct a calibration curve and use the slope of the graph to
calculate PCR efficiency with the following equation: 10 -1/slope-1
Inhibition within samples Add samples to a standard RT-qPCR reaction and look for
changes in the Cq values
RNA purity Measure the ratio of absorbance at 260/280 nm
RNA integrity Visualization of the 28S:18S ribosomal RNA ratio on a 1%
non-denaturing agarose gel