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. 2016 Feb 16;4:e1674. doi: 10.7717/peerj.1674

Table 1. Model predicted effects on stability of 41 observed mutations in EBOV GP.

The one observed mutation that is also on the watch list is indicated in red. The two mutations that our methods falsely excludes as non-functional are indicated in blue. All numerical entries are ΔΔG values in units of kcal/mol.

Mutation Antibody binda Dimer bindb Trimer bindc Monomer foldd
N107D 0.00 −0.09 0.00 1.31
L111F 0.00 0.00 0.00 2.31
I129V 0.00 0.05 0.02 0.77
D150A 0.00 0.00 0.01 0.6
D163N 0.00 1.12 0.57 0.39
I170L 0.00 0.01 0.02 2.31
I170F 0.00 0.03 0.05 16.48
V181I 0.00 0.05 0.00 −0.73
T206M −0.30 −0.33 0.01 −0.14
G212D 0.00 0.19 −0.04 −0.11
Y213H 0.00 0.41 −0.01 1.27
Y214H 0.00 −0.01 0.00 0.18
T216P 0.00 −0.01 0.00 2.27
R219K 0.00 0.00 0.00 0.00
A222V 0.00 0.00 0.00 −0.11
E229K 0.00 0.00 0.00 −0.17
T230A 0.00 0.00 0.00 0.62
T240N 0.00 0.00 0.00 0.86
S246P 0.00 0.00 0.00 −1.11
L254I 0.00 0.00 0.00 0.81
L254V 0.00 0.00 0.00 1.39
Q255R 0.00 0.00 0.00 0.1
I260R 0 0 0 1.78
T262A 0 0 0 −0.08
W275L 0 0 0 0.09
A503V −0.17 0.09 0 0.1
Q508R 0.16 −0.03 0 0.54
Y517C 0.01 0.26 0.01 1.38
G524D −0.01 0.14 2.31 2.12
A526T 0.00 0.02 0.56 0.80
I527T 0.00 0.18 0.15 1.04
P537L 0.00 0.23 0.42 0.53
I544T 0.00 0.36 −0.01 0.47
E545D 0.00 0.5 0.00 0.46
N550K 4.59 0.01 0.00 0.62
D552N 1.76 0.23 0.00 0.13
A562D −0.06 2.98 0.02 0.67
L571R 0.00 0.05 2.34 0.27
L573R 0.00 2.78 −0.25 1.30
W597F 0.00 0.07 0.48 −0.11
W597C 0.00 0.35 3.51 0.26

Notes.

a

Binding affinity between GP and the KZ52 antibody.

b

Binding affinity between GP1 and GP2.

c

Binding affinity between three GP1-GP2 dimers.

d

Folding stability for GP2.