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Summary of results of the search for TcR-α V–J rearrangements in TCGA BLCA, LUAD, and OVCA primary tumor files.
| TOTAL NUMBER OF FILES | NO. OF SAMPLES WITH J’S 14 NUCLEOTIDES AND ABOVE | TOTAL NO. OF V–J COMBINATIONS | NO. OF SAMPLES WITH MORE THAN ONE V–J COMBINATION | NO. OF SAMPLES WITH MORE THAN A TOTAL OF 20 READS FOR ALL V–J COMBINATIONS | NO. OF SAMPLES WITH MORE THAN ONE V PER J |
|---|---|---|---|---|---|
| BLCA | |||||
| 12 | 8 | 16 | 5 | 1 | 0 |
| LUAD | |||||
| 10 | 3 | 7 | 2 | 1 | 0 |
| OVCA | |||||
| 9 | 6 | 12 | 4 | 0 | 0 |
