Table 6. Predictive power of principal component analysis, weighted network analysis and random forest regression in drip loss, pH1, pH24 and meat color based on a multiple regression model.
trait | multiple correlation coefficients | ||||||||
---|---|---|---|---|---|---|---|---|---|
10 principal components of PCA | 10 modules of WNA | 10 metabolites with highest variable importance of RFR | |||||||
RMSE | R2 | CV[%] | RMSE | R2 | CV[%] | RMSE | R2 | CV[%] | |
drip loss | 1.13 | 0.07 | 59.75 | 1.10 | 0.18 | 57.94 | 1.10 | 0.32 | 58.13 |
pH1 | 0.43 | 0.35 | 6.53 | 0.44 | 0.30 | 6.69 | 0.43 | 0.37 | 6.64 |
pH24 | 0.32 | 0.27 | 5.73 | 0.32 | 0.27 | 5.78 | 0.34 | 0.12 | 6.13 |
color | 2.54 | 0.23 | 3.50 | 2.56 | 0.21 | 3.53 | 2.51 | 0.37 | 3.46 |
PCA = principal component analysis; WNA = weighted network analysis; RFR = random forest regression; RMSE—root mean square error; R2—coefficient of determination; CV—coefficient of variation; drip loss measured in Musculus longissimus dorsi (LD) 24 h post-mortem (p.m.); pH1 measured in LD 45 minutes p.m.; pH24 measured in LD 24 h p.m.; color = meat color measured in LD 24 h p.m.