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. 2016 Feb 27;16:54. doi: 10.1186/s12870-016-0738-z

Table 3.

Summary of the de novo assembly results using Trinity

Category Number Total number Mean length (bp) N50 value N90 value Total nucleotides
200–500 bp 500–1000 bp 1000–2000 bp ≥2000 bp
Transcripts 117, 970 74, 290 94, 186 120, 307 406, 753 1, 577 2, 629 755 641, 557, 533
Unigenes 78, 055 25, 178 14, 146 11, 346 128, 725 765 1, 355 293 98, 499, 770