Table 1.
Comparison of precision metabolic engineering, dynamic metabolic engineering, and general metabolic engineering approaches
Characteristic | General Metabolic Engineering | Dynamic Metabolic Engineering | Precision Metabolic Engineering |
---|---|---|---|
Engineering optimization goal | Product titer, yield, productivity | Product titer, yield, productivity | State-based selectivity and response sensitivity |
Temporal behavior | None; optimization through static manipulations | System behavior necessarily changes over time | System behavior may (but does not necessarily) change over time |
Number of possible states | One; static optimization produces singular desired state | Two; change between states initiated at time point during production | Many; states could change over time or be determined by initial concentration of sensory molecule |
Signal that dictates metabolic state | None; state of system predetermined | Exogenous molecules, naturally produced metabolites | Exogenous molecules, naturally produced metabolites |
Methods used to change metabolic state | None; state of system predetermined | Inducible transcriptional, post-transcriptional regulation | Inducible transcriptional, post-transcriptional regulation |
Necessary degree of control between multiple desired metabolic states | None; state of system predetermined | Majority of metabolic flux must be through desired pathways, but leakiness in transcription and enzymatic activity may be permitted | All measurable metabolic flux must be through desired pathways, leakiness in transcription and enzymatic activity not permitted |
Examples | Industrial production of biofuels, pharmaceuticals, commodity chemicals | Industrial production in which titer and productivity can be increased either by shifting from a growth phase to a production phase or by balancing fluxes to reduce toxic intermediates | Metabolite biosensors, portable pharmaceutical production, targeted drug delivery |