Table 4. Selected miRNAs showing relative enrichment in either the retina (top panel) or RPE/choroid (bottom panel).
miRNA | Retina rank | Retina mean1 | Ratio retina versus RPE/choroid2 | RPE/choroid rank | RPE/choroid mean1 | Ratio RPE/choroid versus retina2 |
---|---|---|---|---|---|---|
hsa-miR-182-5p | 1 | 310414 | 121.5 | 29 | 2555 | 0.0 |
hsa-miR-183-5p | 2 | 177857 | 238.4 | 55 | 746 | 0.0 |
hsa-miR-181a-5p | 3 | 104145 | 10.1 | 9 | 10261 | 0.1 |
hsa-miR-124-3p | 8 | 18105 | 98.9 | 107 | 183 | 0.0 |
hsa-miR-9-5p | 11 | 14355 | 16.8 | 49 | 855 | 0.1 |
hsa-miR-192-5p | 17 | 9464 | 13.6 | 57 | 696 | 0.1 |
hsa-miR-96-5p | 20 | 7776 | 79.6 | 129 | 98 | 0.0 |
hsa-miR-181b-5p | 23 | 5317 | 10.9 | 66 | 490 | 0.1 |
hsa-miR-181a-2-3p | 44 | 1696 | 13.1 | 111 | 130 | 0.1 |
hsa-miR-181a-3p | 65 | 589 | 7.0 | 153 | 84 | 0.1 |
hsa-miR-146a-5p | 138 | 86 | 0.0 | 13 | 8460 | 98.0 |
hsa-miR-142-5p | 189 | 38 | 0.0 | 48 | 944 | 24.8 |
hsa-miR-145-5p | 203 | 30 | 0.1 | 69 | 429 | 14.4 |
hsa-miR-451a | 129 | 126 | 0.1 | 45 | 1731 | 13.7 |
hsa-miR-126-3p | 82 | 354 | 0.1 | 21 | 3774 | 10.7 |
hsa-miR-126-5p | 39 | 2075 | 0.1 | 8 | 17939 | 8.6 |
hsa-miR-143-3p | 12 | 14389 | 0.1 | 2 | 106057 | 7.4 |
hsa-miR-23a-3p | 116 | 119 | 0.2 | 58 | 697 | 5.8 |
hsa-miR-27a-3p | 87 | 304 | 0.2 | 38 | 1487 | 4.9 |
hsa-miR-204-5p | 5 | 37292 | 0.2 | 1 | 165078 | 4.4 |
hsa-miR-211-5p | 35 | 2421 | 0.2 | 10 | 9914 | 4.1 |
1Mean expression values (TMM normalization).
2Bold fonts highlight relative enrichment in this tissue.