TABLE 2.
Putative RNA-binding proteins identified by a tandem mass spectrometera
| Name/locus in Newman | Locus in N315 | Mol mass (Da) | % detected by mass | Putative function(s) |
|---|---|---|---|---|
| Hypothetical protein NWMN_0192 | sa0248 | 66,082 | 43.5 | Glycosyl transferase group 2 family protein |
| Probable DEAD box ATP-dependent RNA helicase NWMN_1985 | sa1885 | 56,941 | 36.0 | ATP-dependent RNA unwinding splicing, ribosome biogenesis, and RNA degradation |
| Map-ND2C protein/NWMN_1872 | sa1751 | 65,443 | 22.6 | Binding ECMb and plasma |
| Aerobic glycerol-3-phosphate dehydrogenase/glpD/NWMN_1209 | sa1142 | 64,361 | 23.0 | DNA/RNA-binding repeats in PUR-α/β/γ and in hypothetical proteins |
| Protein map precursor (MHC class II analog protein) NWMN_1872 | sa1751 | 65,443 | 10.7 | Unknown function/S4 RNA-binding domain |
| UPF0051 protein NWMN_0789/sufB | sa0778 | 52,458 | 9.3 | FeS assembly protein SufB |
| Hypothetical protein NWMN_1184 | sa1118 (rnjB) | 62,473 | 4.8 | RNA processing and degradation |
| ATP-dependent hsl protease ATP-binding subunit hslU NWMN_1164 | sa1097 | 52,556 | 5.4 | ATP-dependent protease ATP-binding subunit (S. aureus subsp. aureus TCH70) |
Sequence coverage and peptides are indicated. The gene name, locus, and proposed functions are as predicted in the NCBI and KEGG databases.
ECM, extracellular matrix.