TABLE 5.
Genes downregulated in the BB_0645/ptsG mutant in RNA-seq assay
Locus | Gene product | Replicon | No. of reads (ptsG/WT) | Fold difference (ptsG/WT) |
---|---|---|---|---|
BB_U12 | Hypothetical protein | lp21 | 1/25 | −25.0 |
BB_F32 | vls2-vls16 (silent cassettes) | 28-1 | 20/129 | −6.5 |
BB_S21 | Hypothetical protein | cp32-3 | 10/25 | −2.5 |
BB_H30 | Pseudogene | lp28-3 | 7/17 | −2.4 |
BB_B04 | Chitobiose transporter ChbC | cp26 | 44,261/96,928 | −2.2 |