Table 3.
Genes and motifs related to decay of relative expression as a function of time. Only genes with induced expression (≥ 2 fold) at time 0 relative to the control, but consequently down regulated are included. Results are presented for the genes for the time period in which expression is first downregulated after return to atmospheric pressure following HHP treatment
| Time (min) |
Gene name | Gene Ontology overrepresented terms |
p-value | Motifs overrepresented |
|---|---|---|---|---|
| 5 | MHT1, DAN1, METI4, AGP1, AYT1, MET3, MET2, MET6, MET17, SEO1 | Sulfur metabolism | 5.8 × 10−6 | CBF1 |
| 2.1 × 10−3 | (3’UTR) CGGAGC | |||
| 1.1 × 10−3 | (3'UTR) ACAUUCG | |||
| 10 | CIT2, YLL058w, MET16, NRG1 | Sulfur metabolism | 2.9 × 10−4 | (3’UTR) CGGAGC |
| 15 | YOR378w, YNL120C, FAR1, PRM5, HO, SPR28, MEP1, RTS3, REG2,MET10,MUP3, PRM1, YOR062c, PUT1, DIP5, YET2 | Amine transporter activity and Cell cycle | 1.2 × 10−3 | CBF1 |
| 2.8 × 10−3 | (3’UTR)ACAUUCG |