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. 2016 Mar;26(3):351–364. doi: 10.1101/gr.195602.115

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© 2016 Zhong et al.; Published by Cold Spring Harbor Laboratory Press

This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six months after the full-issue publication date (see http://genome.cshlp.org/site/misc/terms.xhtml). After six months, it is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.

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Figure 3. — Median nucleosome score around all mRNA TSSs (A), around ACS sites at all origins of replication (B), and around all binding sites of Abf1 (C) and Reb1 (D) across the yeast genome. TSS coordinates are taken from Rhee and Pugh (2012), ACS coordinates are taken from Eaton et al. (2010), and TF binding site coordinates are taken from MacIsaac et al. (2006). For comparison, the bottom of each panel shows the average NCP score-to-noise ratios from Brogaard et al. (2012) at corresponding positions.