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. Author manuscript; available in PMC: 2016 Oct 1.
Published in final edited form as: J Biomed Inform. 2015 Aug 29;57:456–464. doi: 10.1016/j.jbi.2015.08.020

Table 2.

Clinical annotations in OpenSpecimen.

Participant Specimen Collection Group Biospecimen
Laboratory Tests Solid Tissue Pathology Solid Tissue Pathology
Family History Hematology Pathology Colorectal Specimen Pathology
Treatment/Treatment Regimen Pancreas Pathology Pancreas Specimen Pathology
Radiation Therapy Prostate Needle Biopsy Pathology Melanoma Specimen Pathology
Chemotherapy CNS Pathology CNS Specimen Pathology
Environmental Exposures Transurethral Prostate Resection Pathology Prostate Specimen Pathology
Alcohol Use Melanoma Pathology Kidney Specimen Pathology
Tobacco Use Lung Biopsy Pathology Lung Specimen Pathology
Health Examination Lung Resection Pathology Breast Specimen Pathology
New Diagnosis Kidney Biopsy Pathology
Recurrence – local/distant Breast Pathology
Radical Prostatectomy Pathology
Retropubic Enucleation
Pathology
Kidney Nephrectomy Pathology
Colorectal Local Excision
Pathology
Colorectal Excisional Biopsy
Pathology
Colorectal Resection Pathology